Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01239 ATGGTTGGTTCCGTTTTCACTCACTTCCTCGTTCTCCCTTCCTCTTCTTCTCCCTCTTCTTCTCCCTCTCTTTCCACTCTCTTCCCATCCAAATTTCCCACCAAACCCATCAATGATTCTGTTCCCTTCACCCTTATCTGCAGCCAATTCCCTTGCAAACTCACTACTTCGTCCCCTTCCCAATTTTCAGCTCCTCGTCGTTACTCATGCTCTGTAAAAAAGATAAATGCCTTGGGAATTCAGCAAAAAGGTTCCATCCGACATGGAGACAACCTTGATGCAATGAAGAGCAGGATTTTGCCGCAGAAGTTTCAATGGAAAATGCCAACGGAATTCCTTAGTACCCTTTTCAACAAACAATCTATGATGAATAACTTTACAACCAAAGATCTTGAAGATGGGGAAAGATCATTCAAATGGGTTTCAGCATTCTTGTTTGGACAAACTATATCAGTGATTTCTCCTGATGTGTCATATGCAAGCGGCTCAGCAAGGATAAATGAGATATATGAGGTTGGAGAGTTGTTTGATTTAAGCATCCAACTAATATACTTGTTATTGCTATTGGGTTTGCTAGGGACTGGGACTTTCTTTGTGATTCGTCAAGTTCTTGTCCGCAGAGAACTCGATCTATCTGCCAAAGAGTTGCAGGAGCAAGTAAGAAGTGGTGATGCTGGTGCAACTGAGCTTTTTGAACTTGGTGCAGTGATGCTGCGCAGGAAATTTTACCCTGCTGCTACCAAGTTCTTGCTTCAAGCTATTGAGAAATGGGATGGGGATAATCCGGATCTTGCCCAGGTTTACAATGCTCTTGGTGTGAGCTATGTCCGCGATGGGAAAGTTGACAAAGGAATTGCTCAGTTTGAGACAGCTGTCAAGCTTCAACCAGGCTATGTCACAGCTTGGAACAATCTTGGAGATGCCTATGAGAGTAAAAAAGACTACAAGCTTGCTCTGAAGGCATTTGAAGAAGTCCTACTATTTGATCCTAACAACAAGGTTGCCAGGCCCAGGAGAGATTCTTTGAAGGGACTTGTTGATGCAACCAAAGGAGTTACTGTCATCAAATCAACAGAGAAGAAATGA 1086 0.4309 MVGSVFTHFLVLPSSSSPSSSPSLSTLFPSKFPTKPINDSVPFTLICSQFPCKLTTSSPSQFSAPRRYSCSVKKINALGIQQKGSIRHGDNLDAMKSRILPQKFQWKMPTEFLSTLFNKQSMMNNFTTKDLEDGERSFKWVSAFLFGQTISVISPDVSYASGSARINEIYEVGELFDLSIQLIYLLLLLGLLGTGTFFVIRQVLVRRELDLSAKELQEQVRSGDAGATELFELGAVMLRRKFYPAATKFLLQAIEKWDGDNPDLAQVYNALGVSYVRDGKVDKGIAQFETAVKLQPGYVTAWNNLGDAYESKKDYKLALKAFEEVLLFDPNNKVARPRRDSLKGLVDATKGVTVIKSTEKK 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01239 361 ProSiteProfiles TPR repeat profile. 299 332 IPR019734 GO:0005515
Pumo3g01239 361 ProSiteProfiles TPR repeat region circular profile. 299 332 - -
Pumo3g01239 361 Pfam Tetratricopeptide repeat 270 329 - -
Pumo3g01239 361 SMART tpr_5 265 298 IPR019734 GO:0005515
Pumo3g01239 361 SMART tpr_5 299 332 IPR019734 GO:0005515
Pumo3g01239 361 PANTHER LD24721P 226 334 IPR047150 -
Pumo3g01239 361 SUPERFAMILY TPR-like 228 336 IPR011990 GO:0005515
Pumo3g01239 361 Gene3D Tetratricopeptide repeat domain 221 343 IPR011990 GO:0005515
Pumo3g01239 361 ProSiteProfiles TPR repeat profile. 265 298 IPR019734 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01239 - - gmx:100800455 454.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g01239 3 19970517 19974467 Pumo3g01239 3 19970517 19974467 ECH