Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01218 ATGAGGATGAGGGTTTTGGTTGTTTATAGTGTTTTGTTGCTGATCCAGTTTTGGCGTGGTGAGGCTGAGACATTCTCGGTGGATGGAAAGGTTTTGGTTTTGGACGAATCAAACTTCGATTCCGCCATAGCTTCCTTCGATCACATCTTGGTTGACTTTTACGCTCCCTGGTGTGGCCACTGCAAGCGTCTCTCGCCCGAGTTAGATGCAGCTGCTCCTGTACTTGCAACCTTGAAGGAACCCATTGTCATAGCAAAAGTAGATGCAGACAAGCATACCCGCCTTGCCAAAAAATATGATGTTGATGCATATCCGACCATTTTGCTGTTTAATCATGGTGTCCCCACAGAATACCATGGACCAAGGAAGGCAGATTTACTTGTTCGTTATCTGAAGAAATTTGCTGCTTCTGATGTTTCCATTCTGGATTCAGATTCTGCTGTGAATACGTTCGTTGAAGAAGCAGGCACTTTTTTCCCAATATATATAGGTTTTGGTTTGAACAATACAGTACTAGAAAAGTTCGGCATAAAGTACAAGAAAAATGCATGGTTTTCTGTGGCAAAGGATTTTTCAGAGGATCTCATGGTATTGTATGACTTTGATAAGATTCCTGCATTGGTTTCCCTGAATCCACAGTACAATGAGCGGAACACATTCTATGGACCCTTTGAAGAGGATTTTTTAGAAGATTTTGTAAGACAAAACTTGATTCCTTTGGCTGTACCTGTGTCCTACGAAACACTTAAGTTGGTGAAAGCAGATGGTAGGAAAATAGTTTTGACAATTGTTGAGGATGAAGATGAAGAAAGATCAAGAGAACTGGTTAAGTTATTGAAGGCTGCTGCATCTGCAAATCGTGACTTAATATTTGGTTATGTTGGAGTTAAACAGATGGATGAATTCGCTGAGAAATTTGATATTGATACTAAACTACCAAAAATGGTTGTTTGGGATAAAAGTGATGACTACCTTTCAGTTGTTGATTCAGAAAGCATTGAGGGGGAGGATCAAGCAACTCAAATCACTAAATTTCTTGAAGGATACAAGGAAGGAAGAACCATCAAGAAAACATTTAGTGGGCCGTCACTAATGCGATTCATCCATCGATCTTTCGACATTAGAATGGTGTACATCATTGTTTTTGTGGTGGCAGTGCTGATGCTTCTTCAGACTTTCAGTAAAGGAGGTGATGAATACCAGAGTGTACCAAATCAAGTTCAAACTGACCATGCAAGCAGTTCTGTTTCAGAAGCTGAAAGCAAAGAGTATAAACCAGGTGACAAGGAAGACTAA 1296 0.4028 MRMRVLVVYSVLLLIQFWRGEAETFSVDGKVLVLDESNFDSAIASFDHILVDFYAPWCGHCKRLSPELDAAAPVLATLKEPIVIAKVDADKHTRLAKKYDVDAYPTILLFNHGVPTEYHGPRKADLLVRYLKKFAASDVSILDSDSAVNTFVEEAGTFFPIYIGFGLNNTVLEKFGIKYKKNAWFSVAKDFSEDLMVLYDFDKIPALVSLNPQYNERNTFYGPFEEDFLEDFVRQNLIPLAVPVSYETLKLVKADGRKIVLTIVEDEDEERSRELVKLLKAAASANRDLIFGYVGVKQMDEFAEKFDIDTKLPKMVVWDKSDDYLSVVDSESIEGEDQATQITKFLEGYKEGRTIKKTFSGPSLMRFIHRSFDIRMVYIIVFVVAVLMLLQTFSKGGDEYQSVPNQVQTDHASSSVSEAESKEYKPGDKED 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01218 431 PRINTS Thioredoxin family signature 57 66 - -
Pumo3g01218 431 PRINTS Thioredoxin family signature 49 57 - -
Pumo3g01218 431 PRINTS Thioredoxin family signature 100 111 - -
Pumo3g01218 431 Pfam Thioredoxin 31 133 IPR013766 -
Pumo3g01218 431 PANTHER PROTEIN DISULFIDE ISOMERASE 9 356 - -
Pumo3g01218 431 SUPERFAMILY Thioredoxin-like 24 134 IPR036249 -
Pumo3g01218 431 Pfam Thioredoxin-like domain 175 334 - -
Pumo3g01218 431 SUPERFAMILY Thioredoxin-like 237 358 IPR036249 -
Pumo3g01218 431 MobiDBLite consensus disorder prediction 400 431 - -
Pumo3g01218 431 CDD PDI_a_family 32 131 - -
Pumo3g01218 431 ProSitePatterns Thioredoxin family active site. 50 68 IPR017937 -
Pumo3g01218 431 ProSiteProfiles Thioredoxin domain profile. 13 136 IPR013766 -
Pumo3g01218 431 Gene3D Glutaredoxin 226 362 - -
Pumo3g01218 431 FunFam Protein disulfide-isomerase 5-2 19 135 - -
Pumo3g01218 431 MobiDBLite consensus disorder prediction 400 415 - -
Pumo3g01218 431 MobiDBLite consensus disorder prediction 416 431 - -
Pumo3g01218 431 Gene3D Glutaredoxin 19 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01218 Pumo-Chr3 19626480 19632806 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01218 K09580 - gmx:100791778 808.905
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g01218 3 19626480 19632806 Pumo3g01218 3 19626480 19632806 ECH