Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01204 ATGTCCAAACAGAGGAATAGTCAAGAAGAAAGTTCAGTTGAAGGTGTTGTAGAAGATCTTGATTATAAGTTGAATGGTTCACAAAAAGTGATGGAAAACAATTCCCAAGAAAACAATAACAACAATAAGGGTTACACAGTGAGAGATGTGGAGATTGCACAAGGACATAACTTTCAAGAAGTAAAAGCTGATTGTTCTGAAGACCCTATCGCATCCTTTGCTGCTGAAGAAGCTGAATATTCTCTTCCTGATGATTTGGATGTCCAAACTTGGGAACCTCCTGAGCCAGAAAACCCACAGGATGATATGGACAACAGTGTGACTTGTAATGATGACGATGAAGACCAGGGCATAGGGATTGCAAACTGGGGTGAGCCTACCTATATGAGTAGTTCTGAGGATGAATTAACTGGGAGCTATAGGTTCAAAGAGGAAAAACAAAGAGCAATGGAAGAAGTAATGAATGGGAAATTCAAGGCACTTGTTGGTCAGCTTCTTAAATCTGTGGGAGTTCCCTCTTCTGATGAAGGTGATAAGAGTTGGGTGGACATAGTTACATCTTTATCATGGGAAGCTGCTTCTTTTTTGAAGCCTGATGCAATTGGAGGTAATGCAATGGATCCTGATGGATATGTTAAAGTGAAGTGCATTGCTGCTGGTTCCCGCAGCCAGAGTCAACTAATCAGAGGTTTGGTCTTCAAAAAACATGCTGCTCACAAGCATATGCCTACTAAGTATAAAAGTCCAAGATTATTACTGATCAGCGGCGTGCTTGGCCATTCTATTAATGGGCTGTCCTCATTTGACTCCATGGACCAGGAGAAAGATGATCTGAAATCTAAAATGGATCGTATAGAAATGTGCCATCCAAATGTTATATTAGTGGAGAAAACTGTTTCTCGTGATATACAAGAGTCAATTTTGGCAAAGGGAATGACACTTGTGCTTGATATGAAGCTTCATCGTCTAGAAAGAGTTGCACGTTGTACTGGTTCACCAATTTTATCATGCGATAATTTGAACGGTCAAAAGCTAAGACACTGTGACTTTATTTATTTTGAGAAGTTTGTGGAGGAACATGATGCTGTTGGTGAAGGAGGAAAGAAGCCCATCAAGACTTTGATGTTCATTGAGGGCTGTCCTACACGTTTGGGCTGCACGATTTTACTGAAAGGAACACACAGTGACGAACTGAAGAGGATCAAATGTGTCATGCGGTGTGCAGTTGTCATGGCATATCACTTAATCCTTGAAACCTCCTTTCTTGTTGATCAGAAAGCAATGTTCTCTACCATTCCTGCTGTGAGTGTAGCAGGTATCTTGCCAACCAATAAAAAATCCTGTGATTCAGCATCCATTAATTCAAGCATTCCATCTCTTGAGTATTCTGCTGAGAATGGAATAGTTAGTACTGATATTCCCATATGCAATGGACTTCATGAAAAAAGCACCAATGGTTTAAACCTAGGATCAGAGGAGTTTTCCCCATTCTCTTGTGAACCATATAATCCAGCCGTCTTTTCTGGGTTCTCAGCTATTTCATCTTCTCTTAAGAAGGTTATGGTGGACAGTTTTCCCTTTGCATCTTCTGCTCCTTATCAATCTTTATCAGCATACTTTGGCTTCAATGGAAGGAAACCTGATGGTCAGGTTAATGAGTCAATTTCTGTTTTAAACTCTCTGGAGGCTGATGAAAATTCCATGATTGAAGCAAAAAGTCATTCTAATGAAGTGAAGTTACTTAATGGTGGACAATCCCTGTCTTCACCTGTGCACTTAGATTCCAGTGGGAATATAATTAAAGATGATGATAATAATAATAGAAAAGAACTCCAAAGTAAAGATGATATCAATGCAGTGTTGGATTCTCAGAGTATTTTGGTCTTGATGTCTAGCCGGAATGCCTTAAGAGGGACTGTATGCCAGCAAAGTCATTTTTCTCATATTATGTTCTACAAGAATTTTGATATTCCACTTGGAAAGTTTCTGGAGGATAACTTACTCAATCAGACAAGACTTTGTGATGCCTGTCAAGAATTGCCAGATGCTCACTTTTATTATTATGCTCATCACAATAAACAGCTTACTATACAAGTTAAATGCTTGCCCCAGGAAAAAAGTTTGCCTGGGGAGGCAGAAGGGAAAATTTGGATGTGGAGCCGTTGTCGAAAATGCAAGTCTGGTTCTACAAAGAGAGTGTTGATATCCATCACTGCCCGTAGTTTATCATTTGGAAAATTTTTGGAGCTTAGCCTTTCTCACTATTCTTCTAGCAGAAAATTGAGTTGTGGACATTCTCTTGATAGGGATTTTCTCTACTTCTTTGGATTAGGTCACATGGTTGCAATGTTCAGATATTCTTCTGTTGCCACATATACTGTGTCTATGCCTCCTCGAAAGCTGGAGTTCAGTGGTGCAATAGGACAAGAGTGGCTTTTGAAAGAGACCCAAAATGTGTATATGAAAGGCATAACATTATTCACAGAAGTTGCAAACTGTTTGAAGACAATACAATTTGATGGCCTTGGAGGATCAATTAGAGATTTCTCTGAGGTTGAGAAGATGTTAAAGCAAGAGCAAGAAGAATTTGAGGCAAACATCAAGACTGCTGTTGCTAAAAAAGGGGATCCAGACCAGGCTGCCTTCAAACTTCTCAGTTTAAACCGATTGATGTGGGATCTTTTGATTGAATCCTATGTGTGGGTTCGACGCTTGTATCCATTACACTCACCTGATGGTTTAAGACTTGAATCTGATGTCTCTGAGAAAGTTATGCAAGAACATGATTATTCAAAGGTGGAAGGTACTGCTAGTAGAGAAACTGGGTCTATGGGTAATTTTATGGAAGATGGGGATGCCAATGTAAAAATTATGTTTGACACATCTGTGCAAGTAAATGAACTACCAATAAAGGAAATTCCTATTAGTGGAGCTCTTCTAGAGTGCAAGGAACTGGATGATCCATCTAACACACAGAATGAGAGGATACCAATTGGTGATGATTTGAGATCAAGGAGATCTTCTGACCAAAAGTTGAATTTGAGTCTGGATGTTATACCAACTCATCTTGAAGTAGGTGAAAACTCTCCAGTTTCTACAGATATTCGAACTAATAATTCAGTTGCCGATTTAAAGGTATTAAACAAAAGTGCTTCCCTGCATTCACCAGTTTCCAGCTTGCTGGATTCAAATGATTGGTTCTGGAAGCCATTTGCTGACATTCGGCAGATAGGCATAAGGGAATTGCAGAAAAGATTCTTGCCAAAATTTGAATTTGTAAGCAGCTCTATTGCTGAATATGTACCCACAGCTAATCAATTAATCACTGAGGAAGGTACAAGGTTGCATATCCCTCTCAAGACTGATAATCATGTTGTGTCTGACTTTGAGGGCGAACCCTCAAGCATAATTGCTTGTGCACTGGCCTTGTTGAATGATGCATATGAGGTGGCAGAAGGTGATGATGAGGATGATAGAAACGTAAGTGTAGTAACTTCAAACTCCACAGAAAATTTGCATGGCTTGACCCATGGTGCTACCTTAACTTCTTCACACTCATTTTCAAGAAGTTATTCAGATTCAGATTCTGTGCATTCTGCAGGAAGCACTTCTTCAGAAGAGTCACGAGCCTCTCGTGCTACAGAAAACCATAGCATAGAGATTGCTATGGGTTATGCAAAATCACTTGGGAGGGAAAAATATTCAGTGATATGTCATTATTTTAAGCAGTTCCGTGAACTTAGAAATTGGTGTTGCCCATCTGAGCTTGATTTTATTGCTTCTTTAAGCCGCTGTAGGAATTGGGATGCCAAAGGTGGAAAAAGCAAGTCCTATTTTGCAAAAACACTTGATGACAGATTCATCATAAAGGAGATTAAGAAGACAGAACTTGATTCATTTTTGGGGTTTTCTTCTCTGTACTTCAAACACATGAAAGAATCATTTGAGTCTGGCAGCCAAACTTGTCTTGCAAAAATCTTGGGGATATATCAGGTTACTAAAAGACATGTCAAAAGTGGAAAAGAGGTTAAATATGAACCCCTCATGGTGATGGAAAATCTTACCTACAATAGAAATATTACTCGCCAGTATGATCTTAAAGGTGCTCTTTATGCCCGGTACAATTCTGCTGCTGATGGTGCTGGAGATGTTCTTTTGGATCAGAACTTTGTGAATGACATGAACTCTTCCCCATTATATGTCAGTCATAAAGCAAAGCGTGTTCTTCAACGCGCTGTTTGGAATGACACATCTTTTCTGAATTCAATCAATGTGATGGATTACTCCTTGCTTGTTGGAGTAGATTCTCAGAAGCGCGAGCTTGTCTGCGGGATCATTGATTATCTCAGGCAGTATACTTGGGACAAGCATCTTGAGACATGGATGAAGTCTTCCCTCGTTGTGCCAAGAAATGTGTTGCCAACTGTAATCTCTCCTAAAGAATACAAAAAGAGGTTCAGAAAGTTTATGGCTACATATTTTTTTAGTGTTCCTGATCACTGGTGTTCCCAGAAATCCTCCAATCCTTGCAAACTTTGTTGCTCAGGGGAAGATGACCCTTCCCAGCAAAAGCCCTAG 4578 0.3969 MSKQRNSQEESSVEGVVEDLDYKLNGSQKVMENNSQENNNNNKGYTVRDVEIAQGHNFQEVKADCSEDPIASFAAEEAEYSLPDDLDVQTWEPPEPENPQDDMDNSVTCNDDDEDQGIGIANWGEPTYMSSSEDELTGSYRFKEEKQRAMEEVMNGKFKALVGQLLKSVGVPSSDEGDKSWVDIVTSLSWEAASFLKPDAIGGNAMDPDGYVKVKCIAAGSRSQSQLIRGLVFKKHAAHKHMPTKYKSPRLLLISGVLGHSINGLSSFDSMDQEKDDLKSKMDRIEMCHPNVILVEKTVSRDIQESILAKGMTLVLDMKLHRLERVARCTGSPILSCDNLNGQKLRHCDFIYFEKFVEEHDAVGEGGKKPIKTLMFIEGCPTRLGCTILLKGTHSDELKRIKCVMRCAVVMAYHLILETSFLVDQKAMFSTIPAVSVAGILPTNKKSCDSASINSSIPSLEYSAENGIVSTDIPICNGLHEKSTNGLNLGSEEFSPFSCEPYNPAVFSGFSAISSSLKKVMVDSFPFASSAPYQSLSAYFGFNGRKPDGQVNESISVLNSLEADENSMIEAKSHSNEVKLLNGGQSLSSPVHLDSSGNIIKDDDNNNRKELQSKDDINAVLDSQSILVLMSSRNALRGTVCQQSHFSHIMFYKNFDIPLGKFLEDNLLNQTRLCDACQELPDAHFYYYAHHNKQLTIQVKCLPQEKSLPGEAEGKIWMWSRCRKCKSGSTKRVLISITARSLSFGKFLELSLSHYSSSRKLSCGHSLDRDFLYFFGLGHMVAMFRYSSVATYTVSMPPRKLEFSGAIGQEWLLKETQNVYMKGITLFTEVANCLKTIQFDGLGGSIRDFSEVEKMLKQEQEEFEANIKTAVAKKGDPDQAAFKLLSLNRLMWDLLIESYVWVRRLYPLHSPDGLRLESDVSEKVMQEHDYSKVEGTASRETGSMGNFMEDGDANVKIMFDTSVQVNELPIKEIPISGALLECKELDDPSNTQNERIPIGDDLRSRRSSDQKLNLSLDVIPTHLEVGENSPVSTDIRTNNSVADLKVLNKSASLHSPVSSLLDSNDWFWKPFADIRQIGIRELQKRFLPKFEFVSSSIAEYVPTANQLITEEGTRLHIPLKTDNHVVSDFEGEPSSIIACALALLNDAYEVAEGDDEDDRNVSVVTSNSTENLHGLTHGATLTSSHSFSRSYSDSDSVHSAGSTSSEESRASRATENHSIEIAMGYAKSLGREKYSVICHYFKQFRELRNWCCPSELDFIASLSRCRNWDAKGGKSKSYFAKTLDDRFIIKEIKKTELDSFLGFSSLYFKHMKESFESGSQTCLAKILGIYQVTKRHVKSGKEVKYEPLMVMENLTYNRNITRQYDLKGALYARYNSAADGAGDVLLDQNFVNDMNSSPLYVSHKAKRVLQRAVWNDTSFLNSINVMDYSLLVGVDSQKRELVCGIIDYLRQYTWDKHLETWMKSSLVVPRNVLPTVISPKEYKKRFRKFMATYFFSVPDHWCSQKSSNPCKLCCSGEDDPSQQKP 1525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01204 1525 CDD PIPKc_PIKfyve 1233 1494 IPR044769 GO:0000285
Pumo3g01204 1525 FunFam Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D 1176 1353 - -
Pumo3g01204 1525 MobiDBLite consensus disorder prediction 77 108 - -
Pumo3g01204 1525 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 26 1507 - -
Pumo3g01204 1525 Pfam TCP-1/cpn60 chaperonin family 165 417 IPR002423 GO:0005524
Pumo3g01204 1525 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1271 1438 IPR002498 GO:0016307|GO:0046488
Pumo3g01204 1525 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1441 1492 IPR002498 GO:0016307|GO:0046488
Pumo3g01204 1525 MobiDBLite consensus disorder prediction 1 44 - -
Pumo3g01204 1525 MobiDBLite consensus disorder prediction 1194 1209 - -
Pumo3g01204 1525 SUPERFAMILY SAICAR synthase-like 1232 1495 - -
Pumo3g01204 1525 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1185 1353 IPR027484 -
Pumo3g01204 1525 MobiDBLite consensus disorder prediction 27 44 - -
Pumo3g01204 1525 SUPERFAMILY GroEL apical domain-like 224 392 IPR027409 -
Pumo3g01204 1525 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase isoform X1 223 392 - -
Pumo3g01204 1525 Gene3D GroEL 223 392 IPR027409 -
Pumo3g01204 1525 SMART PIPK_2 1209 1495 IPR002498 GO:0016307|GO:0046488
Pumo3g01204 1525 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1171 1494 IPR002498 GO:0016307|GO:0046488
Pumo3g01204 1525 CDD Fab1_TCP 159 425 - -
Pumo3g01204 1525 Gene3D - 1354 1495 - -
Pumo3g01204 1525 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase FAB1 1355 1495 - -
Pumo3g01204 1525 MobiDBLite consensus disorder prediction 1194 1213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01204 Pumo-Chr3 19326007 19334112 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01204 242 1507 Acyl Lipid Metabolism Gene Families AT1G34260 47.739 0.0 1082
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01204 K00921 - gmx:100815340 2773.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g01204 3 19326007 19334112 Pumo3g01204 3 19326007 19334112 ECH