Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01135 ATGTTGGCAAAATTAAGAGCTTGGAAAACCAGTAATCAAGATGTGAAGGAAGATGCCCCAAAAAGCATAGACTTCCATGAGGAGTACAATAGTGCATTAAGGACAAAATCCTATGTTGATTGCTTCAATAAAGTTCAATTACTTGCAAACCAGCCTTCCATTGATCACAACCATAACAAATTTTCAGAAGTCCTCCTTGAACCTTGCCAAGAAACTATAGCTTCCATTGTTGATTCAGCAACCCTTTCAAAGACACCAGAACTCAAAAACCTTATGCTAAGTTACTTTGACATTAGTGCAGAGGCCTCACACATTTGCAGCCATCTTCTCAAAAGCATCAACCAGGTCCACTCTAATTATCAGTTTATCCAAAGAGCACTAGACATTAAGGATGGTGACTCTTTGGAAACTTTTGACCTAATCATCTTTGAGCTAAACTCATTCACCAACTCAAATAACCCATTTTCAAACCTTAAAAGCAAAGACTTCAAGCTCATCAATGATAAGCACTCATCAGTATTGCACCATCTAATGTCAATGAGAAAAAAGGTGGGAAGGAAAATCAAGCTTATGAAGTACTTGAAGAAGACATCTGGGATTTGTGTCACAGCAGCTTGTGGCATAGTGGCAATCACAGCCATGGTTATAGCAACACATGCTCTAACAGCAGTTATCATGGGACCAGCAATTCTCAGCTTCCCATTTAAGCAACTTAAGAGGAAGCTTGGAGCCTATAAATCTGCAGCAAATGGGTCTCTTAGTAAAGTTTATGATCAGCTTGATGTAGCAGCCAAGGGGACTTATATATTGAATAGAGACTTTGACACAATGAGTAGACTTGTAGCTCGGCTTCATGATGAAACTGAGCATAACAGGGCAATGGTGCAATTCTGTTTGGACAGGAAAGAAGACAAATTCTCTTTGCAGGTAGTGAAGGAGCTTAAGAAAAGTGATGTTGGGTTCAGGAAACAAGTGGAAGAAATTGAGGAACATGTGTACTTGTGCCTTGTAGCAATAAACCAGGCAAGGGCATTGAACCAGATTCCCAAGAACCCTTTTGTTCTGCTCCTTCTGAGCGAGCTTGTATCGTTTGCAACAAGTAATGAGCTGAGAAAGACTGAAAATTTGATGATGGGTAGTAATGAGATTAAATATTTGTCCGAAGAAGTGTTAGAAGGGGGTTTTGATAGTCAGCAGAAGAAAAATCTCAAGCAAATGGACATAAAGTCTCTGGGTGAGAAGTTTGATGGAGCTTCTTCTGAGGAGGATGAGGATGGGAAGGAGTCGTCGCAAGTTGCTTCTTCATCAAATAGAGGTTTGGAACATTGCATCACAACCCCTGTTGGAACTGAGAGGAACCCACTTATATTTGATGATGAGATTTTTCTTTCTAGATCAATGACAGAAAAGAGGGAATTCCCTAGGCAGGACACATTATTGGACAGGCTGTCTGAGAAGGCAAAGCAACTGCTTACTTACCTAGTGAAGATACAAAATGATGGCACTGTTGAAGTTGATATAGAAATGAGTGCATCTGTTGCTCCAGAATTGTTAGAGCTCCAATCTTTTGCAGAGTCAACAGTGAGTGGAAGTCTTAGTTCAGAATCAAAAAAATCTGTTCCACGGTTACAAATTGTCATACTTGTGGTTGGAACTAGAGGCGACGTACAACCTTTTCTGGCCATTGCAAAGAGACTTCAGGCATATGAACTAAATATTTACTTGCAGGAGTATGGTCATCATGTTAGGCTGGCAACTCATGATAATTTCAAAACATTTGTAAAGTCAGCTGGTGTAGATTTCTATCCTCTGGGTGGTGATCCTCGTGTATTGGCAGGATATATGGCAAGGAATAAAGGTTTAATCCCTTCTGGACCGGCTGAAATATCTGTCCAAAGAAAGCAGCTGAAGGCCATCATTGATTCCCTTCCTCCAGCATGCACAGCACCTGATATGGAAACTGGTGCTCCTTTCAGAGCTCAAGCTATTATTGCCAATCCTCCTGCTTATGGACATGTACATGTTGCTGAGGCCTTTGGGGTGCCCATCCATATCTTCTTCACAATGCCATGGACGCCAACATATGAGTTCCCCCACCCTTTGGCACGTGTTCCTCAAAGTGCCGGTTATTGGCTGTCCTATATAATTGTGGATCTACTGATATGGTGGGGAATGCGAAGAATTATCAATAACTTCAGGAAAACAACATTGAAGCTTGCTCCTATTGCATACTTCAGTATGTACCGTGGATCAATATCCCATTTACCAACTAGCTATATGTGGAGTCCTCATGTTGTTCCAAAACCAAGTGACTGGGGCCCTTTAGTTGATGTTGTTGGTTATTGTTTCTTGAGCCTTGCATCAAAGTATCAACCTCGGGAAGATTTTGTCCAATGGATTGAAAAAGGACCACCTCCTTTATATTTTGGGTTTGGGAGCATGCCTCTTGAAGATCCTAAAGGAACAACAGATGTTATATTGGAGGCACTAAAAGATACAGAACAACGGGGAATTATTGACCGGGGTTGGGGCAATCTAGGGAATTTGGCAGAACTTTCTGACAATGTTTTCCTTCTGGAGGAATGCCCTCACGATTGGCTGTTTCCTCAATGTTCTGCTGTGGTGCATCATGGTGGAGCTGGAACCACGGCTACAGGATTAAAAGCTGGGTGTCCAACAACCATAGTTCCATTCTTTGGAGATCAGTTCTTTTGGGGAGATAGAATACATCAGAAAGAGTTGGGACCAGCCCCAATCCCAATATCTCAGCTCAATGTTGAGAATTTATCAAACGCCATAAGATTCATGCTCCAGCCAGAGGTGAAATCTCGAGCAATGGAAATTGCTAAGTTGATTGAGAATGAAGATGGTGTTGCCGCTGCGGTTGATGCATTTCATCGACATCTACCCGATGATGAGTTACCACTGCCAACTCCAACTCCAGTGGAGGAGGACCACTTGAATCCTTTGCAGTGGTTTTTTCTCCAACTTGGAAAGTTCTGTTGTGCACCTTGTGGTGGTGGTGTGTAG 3030 0.4201 MLAKLRAWKTSNQDVKEDAPKSIDFHEEYNSALRTKSYVDCFNKVQLLANQPSIDHNHNKFSEVLLEPCQETIASIVDSATLSKTPELKNLMLSYFDISAEASHICSHLLKSINQVHSNYQFIQRALDIKDGDSLETFDLIIFELNSFTNSNNPFSNLKSKDFKLINDKHSSVLHHLMSMRKKVGRKIKLMKYLKKTSGICVTAACGIVAITAMVIATHALTAVIMGPAILSFPFKQLKRKLGAYKSAANGSLSKVYDQLDVAAKGTYILNRDFDTMSRLVARLHDETEHNRAMVQFCLDRKEDKFSLQVVKELKKSDVGFRKQVEEIEEHVYLCLVAINQARALNQIPKNPFVLLLLSELVSFATSNELRKTENLMMGSNEIKYLSEEVLEGGFDSQQKKNLKQMDIKSLGEKFDGASSEEDEDGKESSQVASSSNRGLEHCITTPVGTERNPLIFDDEIFLSRSMTEKREFPRQDTLLDRLSEKAKQLLTYLVKIQNDGTVEVDIEMSASVAPELLELQSFAESTVSGSLSSESKKSVPRLQIVILVVGTRGDVQPFLAIAKRLQAYELNIYLQEYGHHVRLATHDNFKTFVKSAGVDFYPLGGDPRVLAGYMARNKGLIPSGPAEISVQRKQLKAIIDSLPPACTAPDMETGAPFRAQAIIANPPAYGHVHVAEAFGVPIHIFFTMPWTPTYEFPHPLARVPQSAGYWLSYIIVDLLIWWGMRRIINNFRKTTLKLAPIAYFSMYRGSISHLPTSYMWSPHVVPKPSDWGPLVDVVGYCFLSLASKYQPREDFVQWIEKGPPPLYFGFGSMPLEDPKGTTDVILEALKDTEQRGIIDRGWGNLGNLAELSDNVFLLEECPHDWLFPQCSAVVHHGGAGTTATGLKAGCPTTIVPFFGDQFFWGDRIHQKELGPAPIPISQLNVENLSNAIRFMLQPEVKSRAMEIAKLIENEDGVAAAVDAFHRHLPDDELPLPTPTPVEEDHLNPLQWFFLQLGKFCCAPCGGGV 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01135 1009 MobiDBLite consensus disorder prediction 415 429 - -
Pumo3g01135 1009 MobiDBLite consensus disorder prediction 415 445 - -
Pumo3g01135 1009 PANTHER STEROL 3-BETA-GLUCOSYLTRANSFERASE 419 999 - -
Pumo3g01135 1009 Gene3D Glycogen Phosphorylase B; 783 952 - -
Pumo3g01135 1009 FunFam Sterol 3-beta-glucosyltransferase UGT80A2 783 952 - -
Pumo3g01135 1009 Pfam Glycosyltransferase family 28 N-terminal domain 545 697 IPR004276 GO:0005975|GO:0016758|GO:0030259
Pumo3g01135 1009 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 807 951 IPR002213 GO:0008194
Pumo3g01135 1009 Coils Coil 480 500 - -
Pumo3g01135 1009 Gene3D Glycogen Phosphorylase B; 545 957 - -
Pumo3g01135 1009 CDD GT1_Gtf-like 545 968 IPR002213 GO:0008194
Pumo3g01135 1009 Pfam Protein of unknown function (DUF677) 55 344 IPR007749 -
Pumo3g01135 1009 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 545 969 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01135 Pumo-Chr3 18182353 18196891 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01135 575 1007 Glycosyltransferase AT1G43620 79.405 0.0 749
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01135 K05841 - gmx:100778448 1141.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g02369 6 46918379 46934223 Pumo3g01135 3 18182353 18196891 PCT