Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01120 ATGGGGGATCGAGGAGAAGACGAGGATTTGCAAATGGCGATTCGGATGAGCATGCAGCGCGCGACGCCGGAGCCGAAGCGCAGCAAGCCGCGGGACGCCGTCGCCGGCGCGGTTTCGGGGTCGCCGGAAGAGTCGCCGGAGTACAAGACCCGGCGACGGGAGCTCATGGCGGCGGCGGCCGAGAAGCGGATGGCGGCAGCGGCGAGGGTTTCGCATTCGCCGTCACCGTCGCCATCGCTGGTGAAGAAGGGCGGTGAATTGGGGAGGAAAGAGGACGATTCGCGTTTGAAGAGTGTGAATTTGAGTAAGGTGCTTTCTGCGGAAGAAGCTAATCAATTGTTTGGGATGGTGTTTGGGAATGAAGTTTCTAAGGGCATTCTTGCACAGTGGAGCAACCAGGGAATTCGGTTTAGCTCTGATCCTGTAACATCAATGGGCCTAGTGCAGCATGAAGGCGGCCCCTGTGGCGTTTTGGCAGCTATACAAGCATTTGTGCTTAAATACATTATTTTCTTCAGTGATGAGTTGAAAGATGTGTCATTCAGGCCACAGAAGGGTCTGGGTGCATCATTCAAAAGTCAGTCTGTTCCATCATATAATTTGTCTTCACTCACTGAAGGTGTAAAAGTAAGAGCCCTTGTAAGAAGTATGGGTGAAATTTTATTTTCATGTGGAAGTAATAGAAGGGCTGTGATTGCAACTTTGAGCATTCCAGATGACATTCAGCGTTTTGAAGGGATTTCAGAGGATGAGGTTGTTACAAAATCACTTCAAGGTCTTTCTATTGAATCTGCCTTGGATCTGCAGAAAGTTCTTAGAGTTGAAATATGCACATCACCAACAACTGCATTGCAAAGGCTTGAAGCAAATCTTCCCCTATTCCAAAGTCGAATGGGAGCATTGCTTTTCCTGATCTCTGCTTTACTTTCCCGGGGACTGGACTTGGTTCAAAGTGACAGGGATGATCCCAGCCTACCACTGGTTACTGCACCTTTTGGGCATGCCTCCCAGGAAATTGTGAATCTACTGCTCTGTGGGGAGGCTGTCCCTAATGTATTTGATGGAAGGATGGATTTAGGTGGAGGAATGTTTGTGAAAGGTATATCCCGATATGTGGAAGTTGGATTTCTTACTCTATTAGAATCCCTGAATTTTTGCAAGGTTGGTCAGTTTCTGAAATCCCCAAAGTGGCCTATATGGGTTGTGGGGAGTGAATCCCATTACACAGTGCTGTTTGCTCTTGACCCCAGCGTCCAAGACGAGAATGAACTGGAAGGAAGGGAAACTCAGATTCGCAGAGCTTTTGATGCACAAGATCAGAGTGGAGGTGGTGGTTTCATTAGTGTGGAAGGGTTCCATCAAGTCCTCAGAGAAACATATATCAAATTTCCACCAGAGAAGCTGGAACATCTTTGCTCTGCAGGGTTCATTGTATGGAGTGAATTCTGGCAAGTAATTTTGGATCTAGACAAAAGCTTGGGAGGTTTGAAGGATTCATCAGGATTGATGGGTAAGAAGGTTTTTGATCTATACCATTTTAATGGGATTGCCAAATCAGACCTGAATGGCAGTCATCAAGTAAATTCTGGGGGCGAAACTCCAGTGCAAAGACCCCGGCTCACAAAATTGAGAGTTTCAGTTCCCCCAAGGTGGACGCCTGAGGAATTTATGGCAGATGTCAAAGTTTCATCTGCTCCTAGTGCAAGTGAGTCTGAAGTATCTAAACCAGAACCTTCTCAGCATGCACCTTTGGTAGACTGCATAAGGACACGCTGGGCACGTGCTGTCTGCAGCTGGTCAGGGGATCCTCCTAGTATAGTCTGA 1824 0.4775 MGDRGEDEDLQMAIRMSMQRATPEPKRSKPRDAVAGAVSGSPEESPEYKTRRRELMAAAAEKRMAAAARVSHSPSPSPSLVKKGGELGRKEDDSRLKSVNLSKVLSAEEANQLFGMVFGNEVSKGILAQWSNQGIRFSSDPVTSMGLVQHEGGPCGVLAAIQAFVLKYIIFFSDELKDVSFRPQKGLGASFKSQSVPSYNLSSLTEGVKVRALVRSMGEILFSCGSNRRAVIATLSIPDDIQRFEGISEDEVVTKSLQGLSIESALDLQKVLRVEICTSPTTALQRLEANLPLFQSRMGALLFLISALLSRGLDLVQSDRDDPSLPLVTAPFGHASQEIVNLLLCGEAVPNVFDGRMDLGGGMFVKGISRYVEVGFLTLLESLNFCKVGQFLKSPKWPIWVVGSESHYTVLFALDPSVQDENELEGRETQIRRAFDAQDQSGGGGFISVEGFHQVLRETYIKFPPEKLEHLCSAGFIVWSEFWQVILDLDKSLGGLKDSSGLMGKKVFDLYHFNGIAKSDLNGSHQVNSGGETPVQRPRLTKLRVSVPPRWTPEEFMADVKVSSAPSASESEVSKPEPSQHAPLVDCIRTRWARAVCSWSGDPPSIV 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01120 607 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 5 24 IPR003903 -
Pumo3g01120 607 MobiDBLite consensus disorder prediction 45 59 - -
Pumo3g01120 607 SMART DUF4205_3 114 481 IPR025257 -
Pumo3g01120 607 PANTHER UNCHARACTERIZED 6 606 IPR039785 GO:0004843|GO:0071108|GO:1990380
Pumo3g01120 607 Pfam Deubiquitinating enzyme MINDY-3/4, conserved domain 116 423 IPR025257 -
Pumo3g01120 607 SMART uim 5 24 IPR003903 -
Pumo3g01120 607 MobiDBLite consensus disorder prediction 1 94 - -
Pumo3g01120 607 SUPERFAMILY EF-hand 426 487 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01120 Pumo-Chr3 17968679 17978717 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01120 K22647 - gmx:100813222 1087.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g01120 3 17968679 17978717 Pumo3g01120 3 17968679 17978717 ECH