Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01119 ATGGGTAGAGTTTGCTTCCATTTCTTGGTAGTGAATTCAATGATCATAATACGAATCCATAATCATGTCCAGGCCAGGGTATCTGTACAAGCACAATGGGTTTTCCTCCGAAGATTCTCTCTGTGGTCGATGAAGAAGGAAGCAGAGTTAGAATCCGCACTCTCTCGCAATCGGCGGTGGATAGTCAACAACCAGATCAAGAACATCATCCTCCGGTACCCGAACAACGAAATCCCCATCGAAACCCTCCAGAAGAAGTTCAAAACCCTCGACCTCCAAGGCAAAGCCCAAAACTGGCTCTCCAAGTACCCATGCTGCTTCGAAATCCACGATAACCGCTGTCGCCTCACCAAACGCATGATGAACCTCGTCGCACACGAACAATCCCTCATCGACGCCCAGGAACCCCTCTTCGCTCGCCGCTTAGCCAAACTCCTCATGCTAACCCTCAACAAGAGACTCACCGTCCTCAAAATCAACGAATTCAAACGCACTTTCGGCTTCCCCGACGATTACGTCATCAGAATCGTCCCAAAGTACCCTAATTTATTCCGAATTGTTAACGAGAGCGGCAGGAGGAGCTCCATGGCCGTTGAGTTGCTGCATTGGGATCCCGACCTCGCCGTCTCCGCCGTCGAAGCCTCGGCGAAGAAGCTCGCTAGGCCGCCGCCGCGGTTTTCGTGCTCTTTGCCGTCCAGTTGGGTGAAATCCTGGGAGAGATTTCGCGAATTTGAATCAATTCCGTACTTTTCGCCGTATTCGGATCCGAGAGGGTTGGTGGCGGGGTCCAAGGAGATGGAGAAGAGGAATGTAGGTTTGGTGCATGAGTTGTTGTCTTTGACTCTTTGGAAGAAGTTTTCAATTGTGAAGTTGGGGCATTTTAGGAGGGAGTTTGTTTTGCCTGATAAGTTGAATGTGTTGTTGCTCAAGCATCCTGCGATTTTCTATGTTTCCAATAAGTATCAGATTTACACTGTGCTTCTCAGAGAGGCGTATGTTGGGTCTCAGCTTGTGGAAAGGATCCTTTGGTGGTTGTGA 1038 0.4952 MGRVCFHFLVVNSMIIIRIHNHVQARVSVQAQWVFLRRFSLWSMKKEAELESALSRNRRWIVNNQIKNIILRYPNNEIPIETLQKKFKTLDLQGKAQNWLSKYPCCFEIHDNRCRLTKRMMNLVAHEQSLIDAQEPLFARRLAKLLMLTLNKRLTVLKINEFKRTFGFPDDYVIRIVPKYPNLFRIVNESGRRSSMAVELLHWDPDLAVSAVEASAKKLARPPPRFSCSLPSSWVKSWERFREFESIPYFSPYSDPRGLVAGSKEMEKRNVGLVHELLSLTLWKKFSIVKLGHFRREFVLPDKLNVLLLKHPAIFYVSNKYQIYTVLLREAYVGSQLVERILWWL 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01119 345 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 39 340 IPR045040 GO:0003723
Pumo3g01119 345 Pfam Plant organelle RNA recognition domain 45 340 IPR021099 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01119 Pumo-Chr3 17966605 17967751 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01119 - - gmx:100814115 572.392
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g01119 3 17966605 17967751 Pumo3g01119 3 17966605 17967751 ECH