Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01060 ATGGATGCCACTCCCTCGAGTATTAACTTCCTTTTACTTTGCTTACTATGTACAATCATGTTCAACTTTGTCATGTGCAGTTCAAAGATTCATTGCAACGAGAAGGACATGAACACACTCCTACGCTTCAAAAAAGGAGTCAGAGATCCTTCAGGCGTGCTCTCCTCATGGTTCCCAAAATTAGATTGTTGTCAATGGACTGGAGTCAAGTGTGATAATATCACTGGTAGAGTTACAGAGCTTAATCTACCCTGTCACACGAATCAACCTGAAGTTGTTGCTTTGGGAGAGAAGGACGACAGATCACACTGCCTAACAGGTGAATTCAGCCTGACATTGTTGGAACTTGAATTTTTGAGCTACTTGAATTTCAGAAACAATGACTTCAAGTCTATCCAATACAATTCAACGGGTAGCCACAAATGCGATGACTTGTCAAGAGGTAACCTTCCCCATCTGTGTGGAAACTCCACCAACCTCCATTATCTTGATTTATCATATAATTCTGATCTTCTCCTTGATAATCTCCATTGGGTTTCCCGTCTTTCCTCATTGCAATATCTTAACCTTGGTGGTGTTCATCTTCCCAAGGAAATTGATTGGCTTCAATCAGTGACCATGCTCCCTTCTCTTTCAGAGTTAACCTTGGAGAGTTGTCAACTTGAAAACATCTATCCATTTCTACAGTATGCTAATTTTACTTCACTTCAAGTTCTAAATCTAGCCCGCAATGATTTTGTATCTGAGTTGCCTAGTTGGTTATTCAATCTTAGTTGTGACATCTCTCATATTGACCTTAGCCAAAATCAGATACATAGCCAACTGCCTAAAACATTGCCAAATCTTAGAAGTATTAAATCCTTGATTTTATATGATAATCATCTCAAAGGACCCATTCCAAATTGGTTAGGACAACTTGAGCAACTAAAACAACTTGATCTTTCTCATAATTTTTTTTCTGGTCCAATCCCCGCAAGTTTGGGAAATCTATCATCTCTAATTGATTTGAAACTCGAGTCAAATGAGTTGAATGGAAATCTTCCAGACAATCTCGGGCAACTCTTCAACTTGGAGATGCTTCTAGTTGCAAAGAATTCCTTGACTGGAATTGTCTCTGAAAGAGATTTACTTTCTTTTCCAAATTTGAAGCACTTTTCCATGATTTCGCCTGCCCTGAGCTTTGATTTTGATCCTGAATGGGTCCCTCCTTTTCAGCTTCTAAGTATTGCATTGGGCTATGTGAAGGACAAAATTCCCGCATGGTTATTCACACAGAGTTCTCTAAAAGATTTAAATATTGTACACTCTACTGCTTCATTTGAACCTCTTGACAAGTTTTGGAACTTTGCTACTCAACTTGAATATTTTCGTTTGGCAAACAACACGATCAATGGGGACATGTCAAATGTGTTGCTAAGCTCAAAATCTGTTTGGTTGGAGTCCAATAATTTAAGAGGTGGCATGCCTCGTTTATCCCCAGAAGTGCGTGTTTTACGCATGTATAATAACTCGTTGTCTGGATCCATTTCTCCTCTCTTGTGTCACAATATGACAGATACAAGCAGTTTAGTGTACTTGGACATGTCTTATAATCATTTATCCGAAGAACTCATAGATTGTTGGAATAATTGGAAATCGTTGGTTCATATTGATTTAGGATACAACAACCTAACAGGCAAGATTCCTCGCTCAATGGGATCCTTGTCTAACCTTCGTTTTCTATACCTGGGAAGCAATAAGTTCTTTGGAGAAGTACCTTTTTCACTAAAAAACTGCAAGAATCTTTGGATACTTGATCTAAGTCACAATAATCTTTCTGGAGTTATACCAAGCTGGTTGGGTCAGAGTGTTAAAGGTCTTCAATTGAGATCCAATCAATTCAGTGGCAATATTCCCACGGAGCTATGCCATCTTCGTTCTTTAATGGTGATGGATTTTGCAAGTAATAGATTGTCTGGATCAATACCCAATTGCTTACATAACATTACGGCCATGCTTTCTAGTTATGCTTCAACTCGTAAAGTTGGCTTTACTGTTCAATCACCAGGTTTCTCAGTAACCATTGCATGTGGTATAAGGATGTTTATAAAAGGCAACGAGTTAAATTATGTTTATTGGATGAATGCCATTGATCTCTCAAGTAATAGGTTGTCTGGAAGTGTGCCTTTAGAGATATATATGCTCACTGGATTACAATCCTTGAATTTGTCCCATAATCAATTAATTGGCACGATTCCTGAAGAGATTGGCAACTTGAAACCATTGGAGTCAATTGATCTATCAAGAAATCATTTCTCAGGAGAAATTCCTGAGTCCATGTCTGCCTTGCATTTTCTTTCAGTGTTGAATCTGTCATTCAACAATTTTATGGGCAAAATCCCAACAGGGACCCAACTTGGTTCTACAAACCTTAGCTATATAGGCAATCCTTACCTCTGTGGACCTCCACTTACAAAGATATGCCCACAACATGAAAAATCCCACGATACAGAACCCATGGGAGAGGGAGAAGATGATGATGATGATAAATCTGAAGTATATTCGTGGTTCTACATGGGGCTGGGAATTGGATTTGCCGTTGGATTTTGGGGAGTTTTGGGCGCCATTTTCTTTTACAGGAGATTCAGACATGCTTATTTTAGATTTCTACACCGAATGTATGAGTTTGTGATCCAAAAGACGAACTCCATAAATGGTCCTTGA 2703 0.3873 MDATPSSINFLLLCLLCTIMFNFVMCSSKIHCNEKDMNTLLRFKKGVRDPSGVLSSWFPKLDCCQWTGVKCDNITGRVTELNLPCHTNQPEVVALGEKDDRSHCLTGEFSLTLLELEFLSYLNFRNNDFKSIQYNSTGSHKCDDLSRGNLPHLCGNSTNLHYLDLSYNSDLLLDNLHWVSRLSSLQYLNLGGVHLPKEIDWLQSVTMLPSLSELTLESCQLENIYPFLQYANFTSLQVLNLARNDFVSELPSWLFNLSCDISHIDLSQNQIHSQLPKTLPNLRSIKSLILYDNHLKGPIPNWLGQLEQLKQLDLSHNFFSGPIPASLGNLSSLIDLKLESNELNGNLPDNLGQLFNLEMLLVAKNSLTGIVSERDLLSFPNLKHFSMISPALSFDFDPEWVPPFQLLSIALGYVKDKIPAWLFTQSSLKDLNIVHSTASFEPLDKFWNFATQLEYFRLANNTINGDMSNVLLSSKSVWLESNNLRGGMPRLSPEVRVLRMYNNSLSGSISPLLCHNMTDTSSLVYLDMSYNHLSEELIDCWNNWKSLVHIDLGYNNLTGKIPRSMGSLSNLRFLYLGSNKFFGEVPFSLKNCKNLWILDLSHNNLSGVIPSWLGQSVKGLQLRSNQFSGNIPTELCHLRSLMVMDFASNRLSGSIPNCLHNITAMLSSYASTRKVGFTVQSPGFSVTIACGIRMFIKGNELNYVYWMNAIDLSSNRLSGSVPLEIYMLTGLQSLNLSHNQLIGTIPEEIGNLKPLESIDLSRNHFSGEIPESMSALHFLSVLNLSFNNFMGKIPTGTQLGSTNLSYIGNPYLCGPPLTKICPQHEKSHDTEPMGEGEDDDDDKSEVYSWFYMGLGIGFAVGFWGVLGAIFFYRRFRHAYFRFLHRMYEFVIQKTNSINGP 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01060 900 Gene3D Ribonuclease Inhibitor 32 228 IPR032675 -
Pumo3g01060 900 Gene3D Ribonuclease Inhibitor 229 323 IPR032675 -
Pumo3g01060 900 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 473 673 - -
Pumo3g01060 900 Pfam Leucine rich repeat 523 581 IPR001611 GO:0005515
Pumo3g01060 900 Pfam Leucine rich repeat 263 317 IPR001611 GO:0005515
Pumo3g01060 900 Pfam Leucine rich repeat N-terminal domain 34 72 IPR013210 -
Pumo3g01060 900 Gene3D Ribonuclease Inhibitor 324 379 IPR032675 -
Pumo3g01060 900 SUPERFAMILY L domain-like 56 393 - -
Pumo3g01060 900 PRINTS Leucine-rich repeat signature 595 608 - -
Pumo3g01060 900 PRINTS Leucine-rich repeat signature 728 741 - -
Pumo3g01060 900 SMART LRR_typ_2 116 140 IPR003591 -
Pumo3g01060 900 SMART LRR_typ_2 568 589 IPR003591 -
Pumo3g01060 900 SMART LRR_typ_2 306 329 IPR003591 -
Pumo3g01060 900 SMART LRR_typ_2 592 616 IPR003591 -
Pumo3g01060 900 SMART LRR_typ_2 776 800 IPR003591 -
Pumo3g01060 900 SMART LRR_typ_2 330 354 IPR003591 -
Pumo3g01060 900 SMART LRR_typ_2 728 752 IPR003591 -
Pumo3g01060 900 SMART LRR_typ_2 233 257 IPR003591 -
Pumo3g01060 900 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 699 821 - -
Pumo3g01060 900 Pfam Leucine Rich Repeat 731 752 IPR001611 GO:0005515
Pumo3g01060 900 Gene3D Ribonuclease Inhibitor 380 830 IPR032675 -
Pumo3g01060 900 SUPERFAMILY L domain-like 473 818 - -
Pumo3g01060 900 PANTHER LRR RECEPTOR-LIKE KINASE 231 349 - -
Pumo3g01060 900 FunFam Leucine-rich repeat receptor protein kinase EMS1 276 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01060 Pumo-Chr3 16529193 16532574 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01060 13 821 Receptor kinase-like Gene Family AT4G13920 29.625 5.94e-75 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01060 - - gmx:100785934 1444.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g01060 3 16529193 16532574 Pumo3g01060 3 16529193 16532574 ECH