Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01059 ATGGGTGCATTAAGGCATGGAATGTGGATGCAAAGAGAGTTGGCTGTGACCTCAACACAACCGAAGCATTTCCAAGTCCTTCCTCTTGGAGAAGATCCGCCAGCAATTACTTCTCTATGCTTTAATCACAATGGAAAGATTTTGGCAGCTTCTGCCGTTGATGGAATGATTCACATGTTTGTTGAAGACATGTCTGCTGGTCTACAAATCACTGGCTGGCCAGCACATGATTCTTCCATCAGTTCTATTCTGTTTGGACCAGATGAGACTAGCATTTTTAGCCTGGGCTCTGATGGGAAGGCAAGTATTATAAATTTAATGTTATTCCTGCTTGTGAAATGGGTTGTACAATTATATTAA 360 0.4167 MGALRHGMWMQRELAVTSTQPKHFQVLPLGEDPPAITSLCFNHNGKILAASAVDGMIHMFVEDMSAGLQITGWPAHDSSISSILFGPDETSIFSLGSDGKASIINLMLFLLVKWVVQLY 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01059 119 SMART WD40_4 66 105 IPR001680 GO:0005515
Pumo3g01059 119 SMART WD40_4 20 61 IPR001680 GO:0005515
Pumo3g01059 119 SUPERFAMILY WD40 repeat-like 21 108 IPR036322 GO:0005515
Pumo3g01059 119 PANTHER OS05G0299300 PROTEIN 22 100 - -
Pumo3g01059 119 Pfam WD domain, G-beta repeat 33 59 IPR001680 GO:0005515
Pumo3g01059 119 Gene3D - 9 110 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01059 Pumo-Chr3 16387321 16389125 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01059 K24760 - gmx:106794628 178.718
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g01059 3 16387321 16389125 Pumo3g01059 3 16387321 16389125 ECH