Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00954 ATGATTAGTGTTGAAGATGTTGCAAAAGAGGAGCAAATTCTTTGGCGTGCAAATTTTGAGGAGTTTATACGTCATCTTAGGCATAAGGTATTGACTGAGAATGTAAGAACTCAGCATGATGATGGAACTGCTACTGTCTTAAGTGCAATATTGGAGGCTACAGGAACTGTAGAGAAAAAAGTGAAAATGGAGAATTCAGTTCCCTTGTCACTGGATACAATTATCACAGAGGTGATGAAGACTGATACAGGACGAACAATGACCATGGATCGTATTAGAGTTTCCCTTAGCCAGTTGGGTTGTTTACCGGGGATGACTCTAGAGGATTCATATAGTATTGATTTGAAGAAAATTATTGAACGGGCTCGAAATGATGAGGTTGAGTCAATTGTGTTGAAAAGGTATGGAAGGGATGCCTTCAGAATGTTCAGGCTACTGTCAAAGGATTGTTGTTTTCATGACACAGATCAGATAGCAGCATCTACTCTGGTTGAGAAAAAGGAAGCTTCAAAGCTGCTATACAAGTTATGGAAGGACAACTACTTGTATATGGAGAAAGTAGGTGCGACGGCAGGAACCAAGCCAATAACTATTTTGATGTGGAAAGTCAATAAGCCTCTGCTTTGGGAATATGTACTAGACGAGATGTACCATGCTGCCTTGAATTTGAGCCTAAGAATGGCTTTTGAGCAGGAAAAGGATGAAGAGCTTTTAAATGTTCCTAAAGACAAGCTTAAGGAGCCAGGGCCACTGCAGAAGAAATACAAACGGCTACTAAATGTCTGGTTACTCCTGGGATCATCATTGATGAAACTCGATGATGCTCTGATGCTTTTCCATGACTTTTGA 849 0.404 MISVEDVAKEEQILWRANFEEFIRHLRHKVLTENVRTQHDDGTATVLSAILEATGTVEKKVKMENSVPLSLDTIITEVMKTDTGRTMTMDRIRVSLSQLGCLPGMTLEDSYSIDLKKIIERARNDEVESIVLKRYGRDAFRMFRLLSKDCCFHDTDQIAASTLVEKKEASKLLYKLWKDNYLYMEKVGATAGTKPITILMWKVNKPLLWEYVLDEMYHAALNLSLRMAFEQEKDEELLNVPKDKLKEPGPLQKKYKRLLNVWLLLGSSLMKLDDALMLFHDF 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00954 282 Gene3D - 18 102 IPR036388 -
Pumo3g00954 282 Pfam RNA polymerase III subunit RPC82 8 90 IPR008806 GO:0003677|GO:0006351
Pumo3g00954 282 FunFam RNA polymerase III subunit, putative 116 204 - -
Pumo3g00954 282 PANTHER RNA POLYMERASE III DNA DIRECTED -RELATED 7 282 IPR039748 GO:0003697|GO:0005666
Pumo3g00954 282 FunFam RNA polymerase III subunit RPC82 family protein 18 112 - -
Pumo3g00954 282 Gene3D - 115 204 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00954 Pumo-Chr3 14633950 14640191 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00954 K03023 - gmx:100784750 508.834
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g00954 3 14633950 14640191 Pumo3g00954 3 14633950 14640191 ECH