Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00945 ATGGCGAACGCAGCATCTGGAATGGCTGTTGTTGATGAGTGTAAATTAAAGTTCCTGGAGCTAAAGGCAAAGAGGAACTACCGTTTCATTGTGTTTAGGATTGAGAACTACGAAGTGGTAGTGGAGAAACTTGGAAGCCCAGAAGAAACCTATGATGACTTTACTGCATCTCTGCCTCCCAATGAGTGCCGCTATGCTGTCTTTGATTTTGATTTCACCACAAATGAAAACTGCCAGAAAGAGCAAGATTTTCTTCATTGCATGGGCTCCGGATACATCAAAGGTGAGAGAGAAGATGGTGTATGCCAGCTCCAAGGACAAATTCAAGAGGGAACTTGA 339 0.4366 MANAASGMAVVDECKLKFLELKAKRNYRFIVFRIENYEVVVEKLGSPEETYDDFTASLPPNECRYAVFDFDFTTNENCQKEQDFLHCMGSGYIKGEREDGVCQLQGQIQEGT 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00945 112 ProSiteProfiles ADF-H domain profile. 5 112 IPR002108 GO:0003779
Pumo3g00945 112 PANTHER COFILIN-RELATED 2 84 IPR017904 GO:0015629|GO:0030042
Pumo3g00945 112 Gene3D Severin 1 89 IPR029006 -
Pumo3g00945 112 SMART adf_2 12 112 IPR002108 GO:0003779
Pumo3g00945 112 SUPERFAMILY Actin depolymerizing proteins 3 90 - -
Pumo3g00945 112 Pfam Cofilin/tropomyosin-type actin-binding protein 14 81 IPR002108 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00945 Pumo-Chr3 14562302 14563928 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00945 K05765 - cmos:111449917 153.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g00945 3 14562302 14563928 Pumo3g00945 3 14562302 14563928 ECH