Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00910 ATGGCCAGGAGAGATCTTGAAAGTGGCGGCGAAGGAACCAAGAACAACAGAACAACCGAGGAAAACTACTCTGCTCCTGAATCTTCCCATGTTTATGAAACTGAGACCCATTGGACATCATGGCTCGTGCCTATGTTTGTGGTTTCTAATATTGCGGTTTTTATTATTACCATGTACATCAACAATTGTCCCAAGAACAACCTACGTTTCCAAGGTCGCTGCGTGGCCAGGTTCCTTGGAAGGTTCTCCTTCCAACCTATGCAAGAAAATCCGTTGCTTGGTCCTTCTTCTTCAACATTGACCAAGATGGGAGCCCTTCGATGGGAAAATGTTGTGGATAGACATCAGGGATGGAGACTTGTCACTTGCATTTGGTTACATGCTGGGGTTATTCATCTGCTAGCTAATATGTTGAGCCTGATCTTCATTGGCATTCGCCTTGAACAACAATTTGGGTTTATTAAGATTGGAATCATATACTTGTTGTCCGGGTTTGGTGGAAGTGTACTGTCGTCTCTATTTATCAGAGACCACATTTCTGTTGGTGCTTCTGGTGCCCTTTTTGGACTTCTTGGCGCAATGCTGTCTGAACTTATCACAAACTGGACTATATATTCCAATAAAGCAATGGCTTTAATAACCCTTCTAGTGATCATTGTGATCAACCTTGGCATTGGCATTTTGCCGCACGTAGATAATTTTGCTCACATTGGAGGATTCCTGGTGGGATTTCTCCTTGGTTTTATTTTGCTGCCACGTCCTCAGTTTGGGTGGTTAGAGCAGCGACGTCTTCCTGCCGGTGTTAGGTTGAAGTCAAAGTACAAGGCTTACCAATATGTTCTATGGATTGTGTCTCTTATTCTGTTGATTGCAGGGTTATCGACTGCATTGGTGATGCTATTTCGGGGTGAGAAAGGGTATGATCACTGCCATTGGTGTCGCTACTTAACATGTGTCCCTACTTCTAAATGGGAATGCAGCAATGACAGTTAA 993 0.4371 MARRDLESGGEGTKNNRTTEENYSAPESSHVYETETHWTSWLVPMFVVSNIAVFIITMYINNCPKNNLRFQGRCVARFLGRFSFQPMQENPLLGPSSSTLTKMGALRWENVVDRHQGWRLVTCIWLHAGVIHLLANMLSLIFIGIRLEQQFGFIKIGIIYLLSGFGGSVLSSLFIRDHISVGASGALFGLLGAMLSELITNWTIYSNKAMALITLLVIIVINLGIGILPHVDNFAHIGGFLVGFLLGFILLPRPQFGWLEQRRLPAGVRLKSKYKAYQYVLWIVSLILLIAGLSTALVMLFRGEKGYDHCHWCRYLTCVPTSKWECSNDS 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00910 330 Pfam Rhomboid family 112 254 IPR022764 GO:0004252|GO:0016020
Pumo3g00910 330 FunFam RHOMBOID-like protein 36 253 - -
Pumo3g00910 330 Gene3D - 33 253 IPR035952 -
Pumo3g00910 330 MobiDBLite consensus disorder prediction 1 28 - -
Pumo3g00910 330 MobiDBLite consensus disorder prediction 12 28 - -
Pumo3g00910 330 PANTHER RHOMBOID-RELATED 19 326 IPR002610 GO:0004252|GO:0006508|GO:0016020
Pumo3g00910 330 SUPERFAMILY Rhomboid-like 38 255 IPR035952 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00910 Pumo-Chr3 14122501 14125545 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00910 - - gmx:100784224 604.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g00910 3 14122501 14125545 Pumo3g00910 3 14122501 14125545 ECH