Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00903 ATGGGGGCTGGTGTTTCTTCTTCTAATAAAGCTGAAAAGGAAGGAGGGTCTATTTCTTCATCATCAACACCCGGTCTTGGTGACATCCCAGAGAGTTGCATCTCCTCCTTGTTCATGAATCTTGATCCACCCGATATATGCAATTTGGCAAGAGTGAATAGGGCCTTTCACCGAGCTTCCTCAGCTGATTTTGTATGGGAATCAAAGTTGCCACCAAGTTACAAGTTTCTTGCTAATAAAGTTCTTGGTGAAGAAAATATTGCTACTATGACCAAGAAAGAGATTTATGCAAAACTTTGCCTACCCAATCGTTTTGATGGTGGTACCAAAGAAGTTTGGTTGGACAAATGTAGTGGGCAAGTTTGTTTGTTCATGTCATCCAAGTCCTTGAAGATTACAGGAATAGATGATAGAAGATACTGGAATTATATTCCAACTGAAGAATCCAGGTTCAAGAGTGTTGCATATCTTCAACAAATGTGGTGGGTTGAAGTGGTGGGGGAGCTAGAGTTCGAATTCCCTGTGGGGAGTTACAGCTTAGTTTTCAGACTCCAATTGGGCAAGGCCTCAAAGAGATTGGGCCGGCGCGTTTGCAACTTTGATCAAGTGCATGGCTGGGACATCAAGCCCGTCCGATTCCAACTCTCCACATCAGACGGCCAGCGTTCACTCTCAGAGTGTTACTTGCGTGGGCCTGGGGAGTGGGCCTACTACCATGTTGGAGATTTCGTGGTCGAAAAGCCCAATGAGCCAACGAATATCAAGTTTTCCTTGGCCCAAATAGATTGCACTCACACCAAAGGTGGCCTCTGCGTAGATAGTGCCATCATTTGCCCAACGGAGTTTAAAGAAAGACTCAAACAAAGTTAG 870 0.4483 MGAGVSSSNKAEKEGGSISSSSTPGLGDIPESCISSLFMNLDPPDICNLARVNRAFHRASSADFVWESKLPPSYKFLANKVLGEENIATMTKKEIYAKLCLPNRFDGGTKEVWLDKCSGQVCLFMSSKSLKITGIDDRRYWNYIPTEESRFKSVAYLQQMWWVEVVGELEFEFPVGSYSLVFRLQLGKASKRLGRRVCNFDQVHGWDIKPVRFQLSTSDGQRSLSECYLRGPGEWAYYHVGDFVVEKPNEPTNIKFSLAQIDCTHTKGGLCVDSAIICPTEFKERLKQS 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00903 289 MobiDBLite consensus disorder prediction 10 24 - -
Pumo3g00903 289 ProSiteProfiles F-box domain profile. 23 69 IPR001810 GO:0005515
Pumo3g00903 289 PANTHER F-BOX PROTEIN PP2-A15 12 287 - -
Pumo3g00903 289 Pfam Phloem protein 2 121 279 IPR025886 -
Pumo3g00903 289 CDD F-box_AtSKIP3-like 26 71 - -
Pumo3g00903 289 MobiDBLite consensus disorder prediction 1 24 - -
Pumo3g00903 289 SUPERFAMILY F-box domain 19 82 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00903 Pumo-Chr3 14055583 14058831 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00903 - - gmx:100795463 567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g00903 3 14055583 14058831 Pumo3g00903 3 14055583 14058831 ECH