Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00889 ATGGGTTCCTCTGCTGCAACAAAAAACATAGCAGATTCAACGTCGTCGTGGCTCTGTGCCATGGTGTTGTTGGCCATGATACTGTTGGGGTCAATAAGGGAAAGCGCCGTGGCAGATGAAAGTGAGGCTATAAAAGGGAACAACCTCCGTCAACGACCGTGTGATGAAATTTACGTTGTGGGAGAAGGGGAGACCCTGCACACAATCAGTGACAAGTGCAACGACCCGTTTATCGTGGAGCGGAACCCGCATATCCATGACCCCGATGATGTTTTCCCTGGCCTTGTCATCAAAATCACCCCCATCCACCAATACTAA 318 0.5 MGSSAATKNIADSTSSWLCAMVLLAMILLGSIRESAVADESEAIKGNNLRQRPCDEIYVVGEGETLHTISDKCNDPFIVERNPHIHDPDDVFPGLVIKITPIHQY 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00889 105 CDD LysM 57 99 IPR018392 -
Pumo3g00889 105 Gene3D LysM domain 48 104 IPR036779 -
Pumo3g00889 105 Pfam LysM domain 58 100 IPR018392 -
Pumo3g00889 105 PANTHER EMBRYO SAC 1 6 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00889 Pumo-Chr3 13805581 13806665 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00889 - - pvu:PHAVU_007G066300g 180.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g00889 3 13805581 13806665 Pumo3g00889 3 13805581 13806665 ECH