Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00887 ATGCAGTCCCTTGGTCAAAATGAGGCCTCTCTAGCATGCCCTCAAGGTTGTTGCCCTACTTCCTTATTGTTCAACCCTCCACCACCACAACCTCAGAACACAACCACCAAACCCAGAAACAGTTCTGCAGAGTGTCGCCACAGCTTTGCAGCCACAACAGCATCCTCTATCTTCCCAAACACCAAATTCACCAACCATGAGTCCCTTCCTTCTCTGCATGAATCATTCAGTGAGTTCAAGAAAGTGTACCCTCAATACTCCGAGACTGACCAAGTGGACCATGTGAGAGCCAAAGAATATTACCACCTCTCTTTCTCCAACCAATCATGCCTTGACTACATTGGTATTGGCCTCTTCTCCTATTACCAACGCCAACACCACCATGACACCTCAAAAACCCAACTTGCATCTTCTTCAACACCCCAATCCCCAACCCAATATGCTGATATTCCCTTCTTTAGCATATCCTACAAGACTGGGAATCTGAAGACACTTTTGCTTCATGGGGGGCAGGAGTCAGAATTTGAGTCTGCAATGAGGAAAAGAATAATGAAGTTCCTCAACATTTCTGAAAATGACTACTTCATGGTTTTCACAGCAAACAGAACCTCAGCTTTCAAACTTGTGGCAGATTCATATCCATTCCAATCTAGCAAGAAGCTTCTCACAGTTTATGACTATGAGAGTGAGGCAGTGGAAGCAATGATTAGCTGCTCAGAGAAGAGAGGAGCCAAGGCCATGTCAGCTGAATTCTCATGGCCTAGGCTGAGGATTCAGTCAACAAAACTGAGGAAGATGATTGTTAGTAAGAGGAAGAAGAAGAAGAAGAAGAGGGGTCTCTTTGTGTTCCCACTTCACTCCAGGGTAACAGGAGCAAGATATCCTTACCTGTGGATGAGCATAGCACAGGAGAATGGGTGGCATGTGTTGATTGATGCTTGTGCATTGGGACCCAAAGACATGGACAGCTTTGGCCTCTCTCTCTTTCAACCTGACTTTCTCATCTGTTCTTTCTACAAGGTCTTTGGAGAAAATCCATCCGGGTTTGGATGCCTTTTTGTCAAGAAATCTGCTATTTCCACTCTTGAATCCTCCTCTTGTGCAGGAATTGTGAACCTTGTGCCAGATAGGTTGCCACTTCATCCATCAGAGGATAAGGATTCTTCTAAGCAAAAACCATTGTCTATCTTACAAGAACAAGAGTTATCTTCCTTGAGTTCTTTCTCTGGTCGGATACAAACCTCACAAGCTATAAAAGTTGAACAAGAATTATCTGAGCTTCAGATCATAGTGGCACCTGCAAAACCAAAAGAAGGTTCTGGAAGTGTGGAAGCAAAAGGACCAGTTGAGAGCCTTCAAAGTAAGAAAGCACAAGATGGTGAGAATGGGGGATTTAACTTTGAGTGCAGGTGTTTGGATCAAGTGGACTCTTTGGGATTGATACTGATCACCAATAGAACAAGGTACCTTATAAATTGGCTGGTGAACTCCATGATGAAGCTGAAGCACCCTAGTGCAGAAGGGGTTCCCCTAGTCAAGATTTATGGGCCAAAGGTGAAATTTGATAGGGGACCTGCTTTGGCTTTCAATGTGTTTGATTGGAAAGGTGAAAAGGTTGAACCTGTCCTTGTACAGAAACTTGCTGATAGGAACAATATATCTCTCAGCTATGGATTTCTGCATCATATTTGGTTTGCAGATAAGTATGCAGAAGACAAGGGAAAAGCTCTACAGACCAAGGAAGGAAGAGGCCAGGCAGTAACTACCAACAAGAAGAAAGATACGGATAAGCTAGGAGTAACTGTGGTTACTGCAGCATTAAGCTTCCTGGCTAATTTTGAAGATGTATATAAACTATGGACTTTTGTTGCCAGGTTCCTTGATGCTGATTTTGTGGAGAAGGAGAGATGGAGATACACAGCTTTCAATCAGAAAACAATTGAAGTTTAA 1950 0.4338 MQSLGQNEASLACPQGCCPTSLLFNPPPPQPQNTTTKPRNSSAECRHSFAATTASSIFPNTKFTNHESLPSLHESFSEFKKVYPQYSETDQVDHVRAKEYYHLSFSNQSCLDYIGIGLFSYYQRQHHHDTSKTQLASSSTPQSPTQYADIPFFSISYKTGNLKTLLLHGGQESEFESAMRKRIMKFLNISENDYFMVFTANRTSAFKLVADSYPFQSSKKLLTVYDYESEAVEAMISCSEKRGAKAMSAEFSWPRLRIQSTKLRKMIVSKRKKKKKKRGLFVFPLHSRVTGARYPYLWMSIAQENGWHVLIDACALGPKDMDSFGLSLFQPDFLICSFYKVFGENPSGFGCLFVKKSAISTLESSSCAGIVNLVPDRLPLHPSEDKDSSKQKPLSILQEQELSSLSSFSGRIQTSQAIKVEQELSELQIIVAPAKPKEGSGSVEAKGPVESLQSKKAQDGENGGFNFECRCLDQVDSLGLILITNRTRYLINWLVNSMMKLKHPSAEGVPLVKIYGPKVKFDRGPALAFNVFDWKGEKVEPVLVQKLADRNNISLSYGFLHHIWFADKYAEDKGKALQTKEGRGQAVTTNKKKDTDKLGVTVVTAALSFLANFEDVYKLWTFVARFLDADFVEKERWRYTAFNQKTIEV 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00887 649 Gene3D - 163 394 IPR015421 GO:0003824
Pumo3g00887 649 SUPERFAMILY PLP-dependent transferases 133 369 IPR015424 -
Pumo3g00887 649 PANTHER MOLYBDOPTERIN COFACTOR SULFURASE MOSC 73 609 - -
Pumo3g00887 649 MobiDBLite consensus disorder prediction 437 457 - -
Pumo3g00887 649 Pfam Aminotransferase class-V 177 369 IPR000192 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00887 Pumo-Chr3 13768874 13771192 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00887 - - gmx:100820534 1192.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g02673 6 63963331 63965540 Pumo3g00887 3 13768874 13771192 ECH
Pumo3g00887 3 13768874 13771192 Pumo3g00887 3 13768874 13771192 ECH
Pumo6g02673 6 63963331 63965540 Pumo3g00887 3 13768874 13771192 PCT