Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00877 ATGGCTTTCTCTTCTATACTCGACAACTTCATCCTCTCTGCTTATAAACCCCAAAACTCCATTCTCCCACTTTCAATCCAACCTTCCTCCTTCCTCCCATGTCCTTCTTCCTTGAAGCCTCAAAAGCTTCCCTTCAGAATCCGCTATGGTTCTTCAACCATCAGAGCCACCTCATCATCCTCATCCCCTTCCACAACCATTGCCGAACCTGAAGGCATTAAGATCAAATCGATTCCAACCAAGCCCATTGAGGGACAAAAGACTGGAACCAGTGGGCTTCGAAAGAAGGTGAAAGTGTTTATGCAAGAAAATTACCTCGCAAATTGGATCCAGGCCCTGTTCAATTCATTGCCTCCGGAGGATTACAAGAATGGTTTGTTGGTGTTGGGAGGTGATGGTCGATACTTTAATCGGGAAGCTGCACAGGTCAACCTTTTTGAATGTGTCATGATAGCAATGATAGCAATCAGATTTAAATCTTGTATTTTAGAGAATCATTTTGCAAATGGTGGATTTATTATGAGTGCAAGCCATAATCCTGGTGGGCCTGAATATGATTGGGGTATTAAGTTTAATTACAGCAGTGGACAACCTGCACCAGAATCCATCACTGACAAGATTTATGGAAACACCCTGTCAATATCTGAGATAAAGATAGCTGACATTCCTGATGTTGACTTATCAAAAGTTGGAAGTTACAAAACAGTATTTGATTTTCAGCTAATCAAAGGTCTTCTTTCACGTCCAGATTTTAGGTTTATATTTGATGCCATGCATGCAGTTACTGGTGCTTATGCTAAACCCATCTTCGTTGATAAACTCAGTGCTAGTCTGGATTCTATTTCAAATGGAATCCCTTTGGAAGATTTTGGACATGGCCATCCTGATCCTAATCTAACATATGCGAAGGATCTTGTCCACGTTCTGTATGCTGAAAATGGACCTGATTTTGGAGCTGCCAGTGATGGGGATGGTGATAGAAATATGATTTTAGGAAGAAGTTTCTTTGTAACTCCTTCAGACTCTGTAGCAGTTATTGCAGCCAATGCAAGAGAAGCGATTCCATACTTCAAGAATGGTGTTAAGGGTCTTGCTCGATCAATGCCAACAAGTGGTGCTCTGGACCGTGTTGCTGAAAATTTGAACCTCCCTTTCTTTGAGGTCCCCACTGGTTGGAAATTTTTTGGGAATCTTATGGATGCTGGGAATTTGTCAGTTTGCGGGGAAGAGAGTTTTGGAACAGGTTCGGACCACATTCGCGAGAAAGACGGCATCTGGGCTGTCTTAGCTTGGCTTTCTATTATTGCACATCGTAACAAAGACAAGAAGCCTGGGGAGAAATTGATCTCTGTATCTGACGTTGTGACAGAGCACTGGGCAACTTATGGAAGGAATTTCTTCTCTAGATATGACTATGAGGAATGTGAATCTGAAGGTGCCAATAAGATGATAGAATACCTACGAGATATTGTGTCTAAGAGCAAGCCTGGTGATAAGTATGGGAGTTATGTCCTCCAGTTTGCAGATGATTTTACATACACTGATCCTGTGGATGGAAGTGTGGTATCAAAACAAGGTGTTCGGTTTGTTTTTACAGACGGTTCAAGGATTATATATCGTTTATCAGGAACTGGTTCTGCAGGGGCAACTGTTAGAGTGTACATTGAGCAGTTTGAACCAGATGTCTCTAAACATGATGTTGATGCTCAAATTGCCTTAAAACCATTAATAGATTTGGCAATATCCGTGTCAAAGCTCAAAGACTTCACAGGGAGGGAGCAGCCTACAGTCATCACATAA 1800 0.4189 MAFSSILDNFILSAYKPQNSILPLSIQPSSFLPCPSSLKPQKLPFRIRYGSSTIRATSSSSSPSTTIAEPEGIKIKSIPTKPIEGQKTGTSGLRKKVKVFMQENYLANWIQALFNSLPPEDYKNGLLVLGGDGRYFNREAAQVNLFECVMIAMIAIRFKSCILENHFANGGFIMSASHNPGGPEYDWGIKFNYSSGQPAPESITDKIYGNTLSISEIKIADIPDVDLSKVGSYKTVFDFQLIKGLLSRPDFRFIFDAMHAVTGAYAKPIFVDKLSASLDSISNGIPLEDFGHGHPDPNLTYAKDLVHVLYAENGPDFGAASDGDGDRNMILGRSFFVTPSDSVAVIAANAREAIPYFKNGVKGLARSMPTSGALDRVAENLNLPFFEVPTGWKFFGNLMDAGNLSVCGEESFGTGSDHIREKDGIWAVLAWLSIIAHRNKDKKPGEKLISVSDVVTEHWATYGRNFFSRYDYEECESEGANKMIEYLRDIVSKSKPGDKYGSYVLQFADDFTYTDPVDGSVVSKQGVRFVFTDGSRIIYRLSGTGSAGATVRVYIEQFEPDVSKHDVDAQIALKPLIDLAISVSKLKDFTGREQPTVIT 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00877 599 Pfam Phosphoglucomutase/phosphomannomutase, C-terminal domain 522 574 IPR005843 GO:0016868|GO:0071704
Pumo3g00877 599 SUPERFAMILY Phosphoglucomutase, C-terminal domain 464 599 IPR036900 GO:0016868|GO:0071704
Pumo3g00877 599 Gene3D - 242 336 - -
Pumo3g00877 599 FunFam Phosphoglucomutase, cytoplasmic 1 336 434 - -
Pumo3g00877 599 PRINTS Phosphoglucomutase/phosphomannomutase family signature 315 330 IPR005841 GO:0005975|GO:0016868
Pumo3g00877 599 PRINTS Phosphoglucomutase/phosphomannomutase family signature 286 299 IPR005841 GO:0005975|GO:0016868
Pumo3g00877 599 PRINTS Phosphoglucomutase/phosphomannomutase family signature 170 184 IPR005841 GO:0005975|GO:0016868
Pumo3g00877 599 PRINTS Phosphoglucomutase/phosphomannomutase family signature 250 269 IPR005841 GO:0005975|GO:0016868
Pumo3g00877 599 Gene3D - 74 241 - -
Pumo3g00877 599 Gene3D - 337 434 - -
Pumo3g00877 599 SUPERFAMILY Phosphoglucomutase, first 3 domains 74 227 IPR016055 GO:0005975|GO:0016868
Pumo3g00877 599 SUPERFAMILY Phosphoglucomutase, first 3 domains 233 336 IPR016055 GO:0005975|GO:0016868
Pumo3g00877 599 ProSitePatterns Phosphoglucomutase and phosphomannomutase phosphoserine signature. 171 180 IPR016066 GO:0000287
Pumo3g00877 599 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 339 462 IPR005846 GO:0005975|GO:0016868
Pumo3g00877 599 FunFam Phosphoglucomutase 5 445 599 - -
Pumo3g00877 599 FunFam Phosphoglucomutase 5 233 335 - -
Pumo3g00877 599 SUPERFAMILY Phosphoglucomutase, first 3 domains 323 469 IPR016055 GO:0005975|GO:0016868
Pumo3g00877 599 PANTHER PHOSPHOHEXOMUTASE FAMILY MEMBER 73 599 IPR045244 GO:0004614|GO:0005975
Pumo3g00877 599 Gene3D - 445 599 - -
Pumo3g00877 599 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 86 215 IPR005844 GO:0005975|GO:0016868
Pumo3g00877 599 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 247 331 IPR005845 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00877 Pumo-Chr3 13652921 13668564 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00877 K01835 - gmx:100802730 1070.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g00877 3 13652921 13668564 Pumo3g00877 3 13652921 13668564 ECH