Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00857 ATGATCAAACAGGTTCTTCTTCTTCTTCTTCTGCTCTTCTTGGCCTCTGGATTGACCCTCTCAGTCTCAGTCTCAGAGTCTGAATCTGTTTCTCTTCTGCCTCACGCTGCTGAGTCCTTCAATGTCAGCTATATCCAGCTGAAGAACGCGGTGACTTGTTCTTACTCGGTGGTTATATCTACTAGCTGTTCGTCTCCTAGGTATACGAGGGATCAGATCAGTCTTGCTTTTGGGGATGCTTATGGCAATCAGATATATGCACCAAGACTGGATGATCCAGCTTCAGGTACATTTGAGAGCTGTTCTTCAGATACATTTCAGATAAGTGGTCCATGTGCATATCAGATATGTTATGTGTACCTATATAGATCTGGATTAGATGGTTGGAAGCCTGAAAGTGTGAAAATCAATAGTTATAACGGCAGGCCTATTACTTTCTATTACAACACATATATCCCCAGAGATACGTGGTATGGCTTTAATTTGTGTAACGGTGCTGCTTCTTCTTCGTACCAGGTATCTATGCAGAAATGGCTTATGTTTATGGTTCTAGGAGTTGTTCTTAGTTTTTGGTTGTAA 579 0.4162 MIKQVLLLLLLLFLASGLTLSVSVSESESVSLLPHAAESFNVSYIQLKNAVTCSYSVVISTSCSSPRYTRDQISLAFGDAYGNQIYAPRLDDPASGTFESCSSDTFQISGPCAYQICYVYLYRSGLDGWKPESVKINSYNGRPITFYYNTYIPRDTWYGFNLCNGAASSSYQVSMQKWLMFMVLGVVLSFWL 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00857 192 Gene3D PLAT/LH2 domain 50 160 - -
Pumo3g00857 192 CDD PLAT 53 164 - -
Pumo3g00857 192 Pfam Embryo-specific protein 3, (ATS3) 45 163 IPR010417 -
Pumo3g00857 192 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 52 160 IPR036392 GO:0005515
Pumo3g00857 192 PANTHER PLAT DOMAIN-CONTAINING PROTEIN 5 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00857 Pumo-Chr3 13419335 13421656 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00857 - - gmx:100499692 339.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g00857 3 13419335 13421656 Pumo3g00857 3 13419335 13421656 ECH