Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00856 ATGCTTCCCAAATCAGTTCCCTCAGCGGAACCCCAACCCAAAACAGTTATCACCAAAACCACCCTCACTTCTTCCCTCACCTCCCTCCTCCAACGCCGTTTCTCCCCCCAAAACCCTCGCACATGGATACTCTTCACCGTCCTCTTCATCCAGATCCTCCTCCTCTGCAACCTCCATAGCTTCCCCTACCCTTCCATCCCCGCCGCCGTCCACCACTCGACTCGCACCCTCGATCAATGCGGCTCCGGCAAGGTCTTCGTCTACGACCTCCCCCAAACCTTCAACCAAGAAATCCTTCTCAATTGCGACAACCTCAACCCCTGGAGCTCCCGCTGCGACGCCCTCTCCAACGACGGCTTCGGCCGCACCGCCGCCGCCCTCGCCGGTATCGTCCCGGAGGACCTCCTCCCGGCGTGGCACTGGACCGACCAGTTCGTCACCGAAATCATCTTCCACAACCGACTAATGAACCACAAGTGCAGAGTCATGAAGCCGGAATCCGCTACGGCCTTCTACATCCCGTTCTACGCTGGACTCGCGGTGGGGAAGTACCTCTGGATCAACTCCACCGAAGAGGAACGCGATCGCCACTGCGACATGATGCTCCGCTGGATTCAGGACCAACCGTTTTTTAAAAGATCAAACGGTTGGGATCACTTCATTACCATGGGCCGCATCACGTGGGATTTTCGCCGTTCCAAGGACCACGATTGGGGCTCTAGCTGCATCTACAAGCCAGGGATAAGAAACGTCACGCGCCTTCTTATAGAGCGTAACCCGTGGGACTATTTTGATATCGGTGTTCCCTACCCCACCGGATTCCACCCGCGCTCCAAATCCGACGTCACGCGCTGGCAGAGCTTCGTCCGCGAGCGTCAACGCCACGCGCTCTTCTGCTTCGCCGGCGCTCCTCGCCGCGCCTTCAAGAACGACTTCCGCGGGATTCTGCTGAGTCAGTGCCGCGACTCGGGCGAGTCGTGCCGCGCCGTGAACTGCACCGGGACGCGCTGCTCCAACGGCACGTCGGCGATTCTCGAAACGTTTCTCGACTCGGATTTTTGCTTGCAGCCGAGGGGGGACAGCTTCACGCGCCGGTCCATTTTCGATTGCATGGTGGCCGGTTCGATTCCAGTTTTTTTCTGGCGGCGCTCCGCGTACCTGCAGTACGAGTGGTTCTTGCCGGCTGAACCGGAGAGTTACTCGGTTTACATAGACCGGAATGCGGTGAAGAATGGAACGTTAACCGTGAAAAGCGTGCTGGAGAAGTTCACTAAGGAGGATGTGAGGAAAATGAGGGAGAAAGTGATCGAGTACATTCCAAGGTTGATTTACGCAAACACGAAAAAAGGGTTAGCGGGTGTGAAGGACGCGTTCGATGTTGCCATCGAAGGAGTGTTCAACAGGATTAAGGAACAGGAACAACCGGAGTTTCATAAGTGGAAATAA 1446 0.5664 MLPKSVPSAEPQPKTVITKTTLTSSLTSLLQRRFSPQNPRTWILFTVLFIQILLLCNLHSFPYPSIPAAVHHSTRTLDQCGSGKVFVYDLPQTFNQEILLNCDNLNPWSSRCDALSNDGFGRTAAALAGIVPEDLLPAWHWTDQFVTEIIFHNRLMNHKCRVMKPESATAFYIPFYAGLAVGKYLWINSTEEERDRHCDMMLRWIQDQPFFKRSNGWDHFITMGRITWDFRRSKDHDWGSSCIYKPGIRNVTRLLIERNPWDYFDIGVPYPTGFHPRSKSDVTRWQSFVRERQRHALFCFAGAPRRAFKNDFRGILLSQCRDSGESCRAVNCTGTRCSNGTSAILETFLDSDFCLQPRGDSFTRRSIFDCMVAGSIPVFFWRRSAYLQYEWFLPAEPESYSVYIDRNAVKNGTLTVKSVLEKFTKEDVRKMREKVIEYIPRLIYANTKKGLAGVKDAFDVAIEGVFNRIKEQEQPEFHKWK 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00856 481 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 83 464 IPR004263 GO:0006486|GO:0016757
Pumo3g00856 481 Pfam Exostosin family 80 416 IPR040911 -
Pumo3g00856 481 Coils Coil 481 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00856 Pumo-Chr3 13411962 13414429 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00856 - - gsj:114403132 914.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g00856 3 13411962 13414429 Pumo3g00856 3 13411962 13414429 ECH