Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00698 ATGAAGCTGAGACTCAGATCTTTGGAATCCAAAGAAACCCTCAAAATCGAAGTCCCCGATTCCTGTTCTCTGCAGCAACTCAAAGACACCGTTTCTCACACCATCTCTTCTTCTTCCTCTTCTCTGCATCTTTCCCTCAACAGAAAGGATGAAATCAACGCCTCTTCGCCGGACGATCCCCTCCACTCCCTCGGCATCGCCGCCGGCGACCTCATCTTCTACTCTCTCAACGCCACCGCCCTCTCCCTCGAAACCCTCCCCCACAAGCCAGAAGCCGCTTCCCGCGACGGACCCACCATCCAAGACTCGCCGGAAACCCTCGCCGGCGACGCCCCCTCCGTTCCCGCCGCCGAAAAGTCTCCGACTTTGGACGAAGCGGAGACAGAACCGATGGAAATGATTGATGGGTCTGACGAGACGGTGGTGGTGAGTACCAATTCAGAGCCTTTCTTTGTGAGAAGGGTTCTGAAAGAAGCCCTTGGAAACAACGTTACTGATTTCAAGTTATTAGTGTTTGCGATTCACGGTGTTGTTCTTGAATCTGGGTTTGTAAGAATCGACAAGGATTCGGGTATGGCGGTTAGTTGTTCTCACCTTCTTGATGATTCTCCTTCGGCTTTTTCGTCGGTGATATCTTTGAGGTATACCCTGCCTGAGATTCTGGCTAATGGTGCTTCTCATAGTGTGAATTTGAAATTTCAGACATTGGGGCATTTTGTGAATGTTTGTGGGTCGTTGTCTGGTGATGTTGGGTCGAGGTTGCATTGTGTTTGTTTGGATAAACGTAAATATGTTAGGCCCTTAGAGTTGATGCTGGCTAATTCTGAATCTAATGGTAGTGTTAGTGATGGGGGAAATATTCTCTTTGGGAATGAAGTTTTTGAAATGTGGAAGATGGTGAAAGATAGGCTTGCATTGCCACTGTTAATTGATCTTTGTGAGAAGGCTGGGATGGATCTTCCACCTTGTTTCATGCGGCTACCGATGGAGCTTAAGCTCTTGATTTTGGAGCGTCTTCCTGGTGTTGATTTGGCCAAAGTGGCTTGCACCTGTTCGGAGTTGCGATACCTGTCCACCAGCAATGAGTTGTGGAAGAAGAAGTATGAGGAGGAGTTTGGAAAAGAAGGAGAGAGTAGAGGGTGGCTTTTCAAGGATTTGTTTGCTGTGTCCTGGGAAACAAAGAAGAGGTGGCAAAGGGTTCCTTTTCGACGACATGGGATTTCAAGACACAGTATTTTCCCATACTTTCGAATGCCTCCAATTTGGGGTGGAGAATTTGGTGTGCAGCCAGTCTATGGTGTAGCATTATCTAGATACCAACCAAGGCGGATTGTCATTCCCCCATGTCTTATGAGAGATTTCAATCAATAA 1371 0.4763 MKLRLRSLESKETLKIEVPDSCSLQQLKDTVSHTISSSSSSLHLSLNRKDEINASSPDDPLHSLGIAAGDLIFYSLNATALSLETLPHKPEAASRDGPTIQDSPETLAGDAPSVPAAEKSPTLDEAETEPMEMIDGSDETVVVSTNSEPFFVRRVLKEALGNNVTDFKLLVFAIHGVVLESGFVRIDKDSGMAVSCSHLLDDSPSAFSSVISLRYTLPEILANGASHSVNLKFQTLGHFVNVCGSLSGDVGSRLHCVCLDKRKYVRPLELMLANSESNGSVSDGGNILFGNEVFEMWKMVKDRLALPLLIDLCEKAGMDLPPCFMRLPMELKLLILERLPGVDLAKVACTCSELRYLSTSNELWKKKYEEEFGKEGESRGWLFKDLFAVSWETKKRWQRVPFRRHGISRHSIFPYFRMPPIWGGEFGVQPVYGVALSRYQPRRIVIPPCLMRDFNQ 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00698 456 SUPERFAMILY F-box domain 321 389 IPR036047 GO:0005515
Pumo3g00698 456 SMART fbox_2 327 367 IPR001810 GO:0005515
Pumo3g00698 456 CDD F-box_AtSKIP22-like 323 368 - -
Pumo3g00698 456 Gene3D - 149 323 - -
Pumo3g00698 456 PANTHER F-BOX PROTEIN SKIP22 1 451 - -
Pumo3g00698 456 SUPERFAMILY Ubiquitin-like 1 73 IPR029071 -
Pumo3g00698 456 ProSiteProfiles F-box domain profile. 321 367 IPR001810 GO:0005515
Pumo3g00698 456 Gene3D - 324 410 - -
Pumo3g00698 456 MobiDBLite consensus disorder prediction 89 129 - -
Pumo3g00698 456 Gene3D - 1 75 - -
Pumo3g00698 456 Pfam F-box-like 326 368 IPR001810 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00698 K10293 - gmx:100796338 764.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g00698 3 10351853 10355417 Pumo3g00698 3 10351853 10355417 ECH