Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00682 ATGACTCGGTCAAAGATAAAACAGGTTCATATCTGTCCTTTCCCTCTCTCTCTTTCAATGCCATCTAAGTATTCACTTGTAGCATTTCTAACCAATTGCTTGGCAGAACCTGAGAGAGCACAGTATGGAGGAGGCATAATTGTAAATCCAGGATTTGATCACAACATAGAGGGTTGGACAGTATTTGGAAAAGGAGCAATCAAGGAACGAATGTCGAATGAAGGCAATAGATTCATTGTTGCCTACAACAGAACACAACCATTGGATAGTTTCTCTCAGAAGGTCCAACTTAAGAATGGAATGTTATACCCCTTTTCTGCTTGGTTTCAGGTCAGTGAAGGAAGTGACACTGTGTCAGTTTTATTTAAAACAAAAGGAAGTGAAATGGTACGAGGTGGCCAAGTGATAGCAAAGCATGGATGCTGGACCCTTCTAAAAGGAGGCATAGTTGCAACCTTCTCAAGTCCTGTTGAAATTTTTTTTGAGAGCAAGAATTCCACCGTGGAAATATGGGCTGATAATATCTCCTTACAACCATATACTAAAAAGCAGTGGAGATCACTACAAGACGCCAGCATTGAGAGGGTACGTAAGAGTGAAGTGAGATTCCAGATAACTGATGTAAATGAAACAGCATTGAAAGGAGCTACGGTCATCGCCAAACCAGTAAAGTTGAACTTCTCATTTGGATGTGGAATGAACCATTATATCCTCTCAAACAAAGACTACCAGAGTTGGTTTGTGTCAAGGTTCAAATTCACAACCTTCACCAATGAGATGAAGTGGTATATTACAGAGAAAAAGCAAGGCGAGGAAAACTACACTATCCCAGATGCCATGATGAAATTTACCAAAGAGAATGGCATTTCTGTGAGAGGCCATAACATTTTCTGGGACAATCCAAAACAACAGCCGGAATGGGTGAAGACCCTATCACCTGCAGATTTAACGAAAGCAGCAGTAAAAAGAATGGAATCTGTGGTTTCAAGATACAAAGGAGAACTGATTGCATGGGATGTGATGAATGAGAATCTCCACTTCCATTTCTATGAGGACAAATTCGGTGAAAATGCTTCTGCAGCAGCATATGCAACAGCTTACGAGCTTGATCCAAAGCCAAAGATGTTCCTGAATGAGTATAACACCATTGAATATAGTGGGGATGAGGCTGCCGGCCCAGCCAAATATATCAAGAAAATTAAGGAGATTCTGTCATTTCCAAGAGTTGCTGGAATGTCAGCAGCAATAGGGTTGCAAGGCCATTTTGCTAGTGGCCAGCCAAATCTTGCTTATATGAGGTCAGGTCTTGATCTTCTTGCTACAACTGGACTTCCAATATGGCTCACAGAAGTGAGTGTGGGTCCGCATCCAAATCAGGCAGAGTACTTGGAAGAGGTACTAAGAGAGGCGTATTCTCATCCTGCCGTTGAAGGGATTATAATGTTTTCTGGTCCAGCTCAAGCTGGTTTCAACGACACTACTCTGGCCGATGAGAATTTCAAAAATACTCCAGCTGGAGACGTTGTGGACAAGCTGATTCAGGAGTGGGGAACTGGGTCTCATATTGCCACAGCAGATGACAGAGGAATTGTAGATATTTCACTGCACCATGGAGATTATGATGTAACTGTTACACATCCTCTAATCCACTCCCCTATAACATTGAATCTAAGTGTAAAGAAAGATTTTTCACTGGAAACCATTCATGTGAAAATGGGTGCATAA 1725 0.4174 MTRSKIKQVHICPFPLSLSMPSKYSLVAFLTNCLAEPERAQYGGGIIVNPGFDHNIEGWTVFGKGAIKERMSNEGNRFIVAYNRTQPLDSFSQKVQLKNGMLYPFSAWFQVSEGSDTVSVLFKTKGSEMVRGGQVIAKHGCWTLLKGGIVATFSSPVEIFFESKNSTVEIWADNISLQPYTKKQWRSLQDASIERVRKSEVRFQITDVNETALKGATVIAKPVKLNFSFGCGMNHYILSNKDYQSWFVSRFKFTTFTNEMKWYITEKKQGEENYTIPDAMMKFTKENGISVRGHNIFWDNPKQQPEWVKTLSPADLTKAAVKRMESVVSRYKGELIAWDVMNENLHFHFYEDKFGENASAAAYATAYELDPKPKMFLNEYNTIEYSGDEAAGPAKYIKKIKEILSFPRVAGMSAAIGLQGHFASGQPNLAYMRSGLDLLATTGLPIWLTEVSVGPHPNQAEYLEEVLREAYSHPAVEGIIMFSGPAQAGFNDTTLADENFKNTPAGDVVDKLIQEWGTGSHIATADDRGIVDISLHHGDYDVTVTHPLIHSPITLNLSVKKDFSLETIHVKMGA 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00682 574 SUPERFAMILY Galactose-binding domain-like 43 179 IPR008979 -
Pumo3g00682 574 Gene3D - 35 181 - -
Pumo3g00682 574 Gene3D Glycosidases 216 520 - -
Pumo3g00682 574 PANTHER GLYCOSYL HYDROLASE 30 561 IPR044846 GO:0004553|GO:0005975
Pumo3g00682 574 Pfam Glycosyl hydrolase family 10 223 470 IPR001000 GO:0004553|GO:0005975
Pumo3g00682 574 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 219 512 IPR001000 GO:0004553|GO:0005975
Pumo3g00682 574 SUPERFAMILY (Trans)glycosidases 214 519 IPR017853 -
Pumo3g00682 574 SMART glyco_10 260 511 IPR001000 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00682 Pumo-Chr3 10134188 10139462 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00682 19 562 Glycoside Hydrolase AT4G33840 47.993 0.0 536
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00682 - - gmx:100777980 990.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g00682 3 10134188 10139462 Pumo3g00682 3 10134188 10139462 ECH