Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00681 ATGAAGGTTGCTGCAGAAGGCTGCAACATGTTGTTCATAATCTCTTCCCTTTTACTGATCTCAGAACCTCGGAGAGCACAGTATGGAGGAGGCATTATAGTAAATCCAGGATTTGATCACAACATAAAGGGTTGGACAGCATTTGGAAAAGGAGCAATCAAGGAACGAATATCAAATAAAGGCAATAGATTCATTGTTGCTCACAGCAGAACACAACCCTTGGATAGTTTCTCTCAGAAGGTTCAACTTAAGAAAGGAATGCTATACACCTTTTCTGCTTGGTTTCAGGTCAGTGAAGGAAGTGACACTGTTTCAGTTATGTTTAAAACAAAAGGAAGTGAAATGGTACGAGGTGGCCAAGTGATAGCAAAGCATGGATGCTGGACCCTTCTAAAAGGCGGCGTAGTTGCAAACTTTTCAAGCCCTGTTGAAATTCTTTTTGAGAGCAAGAATTCAACTGCGGAAATATGGGCTGACAATATCTCCTTACAACCATTCACTAAAAAGCAGTGGAGATCACTACAAGAGGCCAACATTGAGAGGGTACGAAAGAGGAAGGTGAGATTCCAGATAACTCATGTAAATGAAACAGCATTGAAAGGAGCTAAAGTCATCACCAGACCAGTAAAGTTGAACTTCCCATTTGGATGTGGAATGAACCATTATATTCTCACCAACAAAGACTACCAGAGTTGGTTTGTGTCGAGGTTCAAATTCACAACTTTCACCAATGAGATGAAGTGGTATAGTACGGAGAAAAAGCAAGGCGTGGAAAACTACACTATCGCAGATGCCATGCTGAAATTTACCAAAGATAATGGCATTTCTGTGAGAGGCCATAACATTTTCTGGGACGATCCAAAATATCAGCCTGAATGGGTTAAGACCCTATCACCTGAAGATTTAACTAAAGCAGCAGCAAAAAGAATGGAATCTGTGGTTACAAGATACAAAGGAGAACTGATTGCATGGGATGTGATGAATGAGAATCTCCACTTCCACTTCTATGAGGACAAATTCGGTGAAAACGCCTCTGCAGCAGCATACGCAACAGCTTACGAGCTTGATCCAGAGCCAAAGATGTTCCTGAATGAGTATAACACCATTGAATACAGTGGGGATGAGGCTGCCAGCCCTGCCAATTACATCAAGAAACTTAAGGAGATTCTGTCATTTCCAGGAGTTGCTGGAATGTCAGCAGCTATAGGGTTGCAAGGCCATTTTGCTAGTGGCCAGCCAAATCTTGCTTATATGAGGTCAGGTCTTGATCTTCTTGCTACAACTGGACTTCCAATATGGCTCACAGAAGTGAGTGTGGATCCACAACCTAGTCAGGCAGAGTACTTGGAAGAGGTACTAAGAGAGGCTTATTCTCATCCTGCTGTTGAAGGGATTATAATGTTTTCTGGTCCAGCACAAGCTGGTTTCAACGCCACTACTCTGGCAGATGAGAATTTCAAGAATACTGCAGCTGGAGACGTTGTGGACAAGCTCATTGATGAGTGGGGAACTGGGCCTAATATTGCCACAGCAGATCACAGAGGATATGTAGACATTTCACTGCACCATGGAGATTATGATGTAACTGTTACACATCCTCTAATCCACTCCCCTATAACATTTAATCTATGTGTAAAGAAAGATTTTTCACTGGAAACCATTCATGTGAAAATGCGTGCATAA 1683 0.4219 MKVAAEGCNMLFIISSLLLISEPRRAQYGGGIIVNPGFDHNIKGWTAFGKGAIKERISNKGNRFIVAHSRTQPLDSFSQKVQLKKGMLYTFSAWFQVSEGSDTVSVMFKTKGSEMVRGGQVIAKHGCWTLLKGGVVANFSSPVEILFESKNSTAEIWADNISLQPFTKKQWRSLQEANIERVRKRKVRFQITHVNETALKGAKVITRPVKLNFPFGCGMNHYILTNKDYQSWFVSRFKFTTFTNEMKWYSTEKKQGVENYTIADAMLKFTKDNGISVRGHNIFWDDPKYQPEWVKTLSPEDLTKAAAKRMESVVTRYKGELIAWDVMNENLHFHFYEDKFGENASAAAYATAYELDPEPKMFLNEYNTIEYSGDEAASPANYIKKLKEILSFPGVAGMSAAIGLQGHFASGQPNLAYMRSGLDLLATTGLPIWLTEVSVDPQPSQAEYLEEVLREAYSHPAVEGIIMFSGPAQAGFNATTLADENFKNTAAGDVVDKLIDEWGTGPNIATADHRGYVDISLHHGDYDVTVTHPLIHSPITFNLCVKKDFSLETIHVKMRA 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00681 560 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 205 498 IPR001000 GO:0004553|GO:0005975
Pumo3g00681 560 SMART glyco_10 246 498 IPR001000 GO:0004553|GO:0005975
Pumo3g00681 560 Pfam Carbohydrate binding domain 31 138 IPR003305 GO:0016798
Pumo3g00681 560 Gene3D - 21 166 - -
Pumo3g00681 560 PANTHER GLYCOSYL HYDROLASE 21 547 IPR044846 GO:0004553|GO:0005975
Pumo3g00681 560 Pfam Glycosyl hydrolase family 10 210 456 IPR001000 GO:0004553|GO:0005975
Pumo3g00681 560 SUPERFAMILY (Trans)glycosidases 200 505 IPR017853 -
Pumo3g00681 560 SUPERFAMILY Galactose-binding domain-like 29 165 IPR008979 -
Pumo3g00681 560 Gene3D Glycosidases 207 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00681 Pumo-Chr3 10128337 10131896 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00681 15 548 Glycoside Hydrolase AT4G33840 48.231 0.0 538
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00681 - - gmx:100777980 1038.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g00681 3 10128337 10131896 Pumo3g00681 3 10128337 10131896 ECH