Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00665 ATGACAATACCCAAACGAAGCTTTTCTCGAATTGACACATTGGAGCTGAAAGCTCTGATTGTTCGGAAGGTTGGTCATCAGAGAGCTGACAAGTACTTTGATCAGCTTCGAAGATTATTGAGTTTAAAGATAAGCAAGTCAGAGTTTGACAGGGTTTGCCTCGTGATAATTGGGAGGGAAAATATCCCTCTTCACAATCAACTCATTAGAGCGATTCTGAAGAATGCTTGTCTGGCTAAAGTCCCACCTGTGAGAGGCTCTGCAAGAGTAGGGAGTGCTTCCAGTGTAAAAGATTCAAATGGGTTGCAGAGAGGATCTATTCAAACGATGTTTGGGGATGCGTTTCCTCCTTCCATGCGGAGGATTGGCTCTTTGGCTGCTCGAGATCGTAGGTTTAAGGGCCGCCAAAATTCTTTGGGGCCGCTTGGCAAGCCCCATTTTGGTCTCACGTCTGAAGAATTGGTATATAAGACACTGGAGCAGCAGAGTGCAACAGAACTGAATTCCCTTGGCAGTAGACCTCCTATTTCTGTTGAAGAAGGAGAGGAGGTTGAGCAGATGGCTGGAAGCCCCAGCATTCAAAGTAGGAGCCCAGTTACAGCTCCTCTTGGTATATCCATGAATTTTGGTCGTGGTCGTAGACGTCATTCTAATGTATCATTATGTAGCAAAGATTATCCAGAGACCTGTCACAGCAATGGACACCTCCCTGACACTAGATCTTTGAGGAGTCGTTTGGAGCAAAAGTTGGAGAAAGAGGGTTTAACTGCGACTGTGGATTGTGTAAATCTATTGAATAATGCACTGGATTCGTATCTGAAGAGGTTGATCGAATCCTTTATGGATCTAGCTGGTTCAAGATCTGGAAATGAGCACGTAAGACAACAACAACACAGACAGTTGGTAACCAGGTCAAATGTATTGCTACCTGGAAGATGTATGCAGACAGCAACAAGATCGTCTGGTGCATCTGTTTTAGATTTTCGTCTTGCAATGGAATTAAATCCTCAAGTTCTTGGACCAGATTGGCCGATACAACTTGAGAAGATTTGCATACGTGCCTCTGAAGAGTGA 1074 0.4441 MTIPKRSFSRIDTLELKALIVRKVGHQRADKYFDQLRRLLSLKISKSEFDRVCLVIIGRENIPLHNQLIRAILKNACLAKVPPVRGSARVGSASSVKDSNGLQRGSIQTMFGDAFPPSMRRIGSLAARDRRFKGRQNSLGPLGKPHFGLTSEELVYKTLEQQSATELNSLGSRPPISVEEGEEVEQMAGSPSIQSRSPVTAPLGISMNFGRGRRRHSNVSLCSKDYPETCHSNGHLPDTRSLRSRLEQKLEKEGLTATVDCVNLLNNALDSYLKRLIESFMDLAGSRSGNEHVRQQQHRQLVTRSNVLLPGRCMQTATRSSGASVLDFRLAMELNPQVLGPDWPIQLEKICIRASEE 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00665 357 PANTHER TRANSCRIPTIONAL ADAPTER 1 4 356 IPR024738 GO:0070461
Pumo3g00665 357 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 8 283 IPR024738 GO:0070461
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00665 Pumo-Chr3 9948661 9950773 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00665 - - gmx:100817344 635.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g00665 3 9948661 9950773 Pumo3g00665 3 9948661 9950773 ECH