Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00202 ATGACATCTTATATTTTCATGGACATGGGGGTTACAAGTTTTCTCAAAAACTGTACCTTCTTGCTGGCAATTCTTACTTTGCTTTCAAGTTTTCTCTTGAACTGTGTCATGGCTAGTGTTTACACTGTTGGTGACCAAGAAGAATGGAGTAGCCAAACAAATTATGCTTCATGGGCAGAGAGAAACAATTTTAGCCGCGGCGATGTTCTTGTTTTCAAGTATGTGAAAGGGCAACATAATGTGTATGAAGTGACAGAAGACACTTTCCGATCGTGTGATGCAAGTAGTGGAGTGTTGGCCAAGTACGAGAGTGGAGAAGATCAAGTGGCACTGAATGAGGTGAAGAGATATTGGTTCATTTGCAACATAGCAGGGCACTGCCTTGGGGGCATGAGGTTTGGAATTGAAGTAAAAGATGGTAACAATGTTACTAATTCCACGGATGGTGGTGGTGCATTTCACCCACCAATTGAACCAACTCCCTCGGATAATTCTTGTACCAGTTATTATGTATCTCAAAGATGGAGAGTGATTGAGAATTTTATTCCTTTCGGATTATTATTGTTCAACTATTGTTTTTGA 582 0.4021 MTSYIFMDMGVTSFLKNCTFLLAILTLLSSFLLNCVMASVYTVGDQEEWSSQTNYASWAERNNFSRGDVLVFKYVKGQHNVYEVTEDTFRSCDASSGVLAKYESGEDQVALNEVKRYWFICNIAGHCLGGMRFGIEVKDGNNVTNSTDGGGAFHPPIEPTPSDNSCTSYYVSQRWRVIENFIPFGLLLFNYCF 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00202 193 ProSiteProfiles Phytocyanin domain profile. 39 139 IPR003245 GO:0009055
Pumo3g00202 193 FunFam Blue copper binding protein-like 37 142 - -
Pumo3g00202 193 CDD Phytocyanin 40 137 - -
Pumo3g00202 193 Gene3D - 37 143 IPR008972 -
Pumo3g00202 193 Pfam Plastocyanin-like domain 49 131 IPR003245 GO:0009055
Pumo3g00202 193 PANTHER BLUE COPPER PROTEIN 37 137 IPR039391 GO:0009055
Pumo3g00202 193 SUPERFAMILY Cupredoxins 38 137 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00202 Pumo-Chr3 2598155 2598974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00202 13 137 Miscellaneous Gene Families AT2G31050 38.095 1.20e-21 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00202 - - gmx:100788784 337.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g00202 3 2598155 2598974 Pumo3g00202 3 2598155 2598974 ECH