Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00201 ATGCGTGCAACAAATACTCGTTCCTCTGTGCAGAGTCTTTCGCATATTCTTCTTCTTCCTCATCGTCGTCGTCTTCGTCTGATACCCAAACATCTGGTTCTTTTTCGCAAGATGGGAGTTCAACGACATGAAGCGCTTTCTGAAGACAATGAGCCTGCTGAAAATGCTTGTGCTAGTAGTTCTTTGAACCAAAGTGCTCTTGCTAGTGAGTCTGCCAACAGCAATCCAAGTGTAAATACTGAAAGTAGTGAAGTTAATGAACCGGGTGACATTTCTTATAAGAAAAGTAATACACTGCATATCTACAGACAAGATGTTGTGAAAAATAATATCAGTGGCATGATTGGGATTGTGACAGAAGTTGCCGGTGATTCGGATTCGGATTCAGATAGCAGCATCACTGATGATGAGAATGATAGTGAGGATGAGGATGGTGATGATGAGGAAGGCGATGACAGTAATAATGCTAGTAGAAATTCTGAAAGTAATGGTGCTTCTGGGCACTGTAAAACCGATGCTCTTCTGGCTGACCAGCTGCGTGTACTGTGGATGGACGAATCTGAATCGACTCAAAATTTCAGTGATGTCGAAGTTGTTGATCGTGGATTTTTACATGGGGATTTTGTTGCTGCTGCTTCAGACCCTACTGGGCAAGTGGGCGTAGTGGTTGATGTCAATATATGTGTGGATCTGTTGGCTCATGATGGATACATTATAAAAGATGTCTCATCAAAAAATTTAAAGCGTATTAGGGATTTCACTGTTGGTGATTATGTGGTGCTTGGGCATTGGCTAGGCAGAATTGATGATGTTTTGGATAATGTAACTGTCTTATTTGATGATGGTTCAGTTTGTAAAGTCTCGAAAGCAGATCCATTGAATCTTAAACCGATTTCTAAGAATATTCTTGAAGATGGGCATTTTCCTTATTACCCAGGGCAACGGATAAGGGCTAGCTCCTCATCAGTTTTCAAGAATTCAAGATGGCTGTCTGGCTTGTGGAAAGCAAATAGGTTAGAAGGTACGGTCACTAAAGTTACAGTTGGATCGGTGTTTGTTTATTGGATAGCATCTGCAGGTTATGGGCCATATTCTTCTACTGCCCCAGCTGAGGAGCAGAGTCCAAAAAACTTAAAATTGTTGTCCTGTTTTGCTCATGCAAATTGGCAATTGGGTGACTGGTGTCTCTTACCCTCATCAGTACTGTCATCCTCAGCTTCCATGGACAAAGGCATATCAAAATTGGAACTTAATGATTCTGCTAACAATGAATTAGATTCTAATCAGACAGGAAGTGGATGTGATTCAGAAGAAGCTACAGTTGAGGAAACAAATGGGAATAAGGATACTATGGACCTTGATCCAGCTGATGTTTTGGAAGGGAATAATGGAAATGATAAAAGTAATCCTTCACGTGATTCTAGCTCATGCAGCAGTTCTATCTCTGTATCAAAGGAACCTGTCCATGAAGCTTGGCCACTTCACCGCAAGAAAATTAGGAAAGTTGTCATCAGGAAAGATAAAAGGGCCCGAAAGAAAGAGGAAAGCTTTGAGAAAGCTCTTTTGATTGCCAACACAAGGACAAAAGTTGATGTTGCATGGCAGGACGGAACAATAGAGCGTGAACTAAATTCTACAAGTTTAATTCCTATAGATAATCCTGGTGATCATGAATTTGTTTCAGAACAATATGTGGTAGAGAAGACCTCCGATGATGGTGAGGATATTTCTGAAGCTAGGCGAGTTGGGGTTGTGAGAAGTGTTAATGCCAAGGAGCGGACAGCTTGTGTGAGGTGGTTAAAAAAAGTTGCCAGAGCAGAAGATCCTCGAGAGTTTGACAAGGAGGAAGTTGTAAGTGTGTATGAGCTAGAGGGCCATCCAGATTATGATTACTGCTATGGGGATGTGGTTGTTCGCCTGTCACCTGTGTCTGTCTGTTTAGAAACAGCTTCTGTTGGAGAGTCCGCTGAGAAATCAACGCAGAAAACTGAAGAGAGTGGGATTAAAATGGATGTAAATATCCAAACTGGTGAAACTTGTGTGCAATTTTCTGACCTCTCTTGGGTTGGAAATATAACTGATCTTAAGAATGGTGATATTGAAGTTACTTGGGCTGATGGGATGGTATCAACGGTTGGACCCCAAGCAATCTATGTGGTTGGTCGAGATGATGATGATGAATCAATTGCTGCTGGGAGTGAAATAAGTGATGCTGCAAGCTGGGAAACTGTTAATGATGATGAAATGGAAGTCCTTGAGGATTCTGGAGAGGATATTGAGAGGGAAAATTCAAGCAGTGTTACTTCTGAGGCAGAAGAAAGTGGAGAGAATGATTTTGGTAGGGCTGCAGCTCTCTCTGTTCCCCTAGCAGCATTTCGATTTGTCACTAGACTTGCCAGTGGAATATTCTCAAGGGGCCCAAGGAACTTGGATCCTATTCCCTTGGAGATAAATGCTGAATGTGAACATCCATCACCAGTAGTTAATGATGAATCTACTTCACAGAAACATATTGTCATTGATGGTGATAATTCAGGCAATAAGAATGAAAGGTATGAGGAGGTTGTTTCAGAAGCAACTGAAACTCTGGAAGCATGTGTGGCACTCTGTAGATTGAGAAATGAAGATGCTCCTGCAACTGCAAGTTGTGATAATGACACTTGCAGTTTGAAACATTTTGACATCACTAAAGATCCATCGGACCACTATTTTATTGGTGCAAATGGACAGAGTAACAACCGGAAATGGCTGAAGAAAGTGCAACAAGATTGGAGCATACTGCAGAATAACCTTCCTGAGGACATCTATGTACGAGTTTATGAAGATAGAATGGATCTCTTGAGAGCAGTTATTGTAGGGCCATATGGAACCCCTTACCAAGATGGACTCTTTTTCTTTGATTTTCACCTTCCGCCAGAATACCCTGATGTTCCACCGTCAGCATACTATCATTCTGGTGGTTGGCGGATTAACCCTAATTTGTATGAGGAAGGGAAGGTTTGCCTTAGCCTTCTAAATACATGGACAGGCAGAGGAAATGAAGTATGGGATCCAAAATCTTCTAGCATCCTTCAAGTCCTAGTTTCACTGCAAGGCTTAGTACTCAACTCTAAGCCTTACTTCAATGAAGCTGGGTATGATAAGCAGGTTGGAACAGCCGAAGGAGAGAAAAATTCATTGTCATACAATGAGAATACCTTTTTACTTAACTGCAAGACTATGATGTATCTTATGAGGAAACCCCCCAAGGATTTTGAAGTGCTCATCAAAGAACATTTTAGGAGGCGGGGTCATAACATCCTTAAGGCTTGTGATGCATATATGAAAGGTTACTTGATTGGCTCGCTGACTAGAGATGCCTCTGCAAGTGAAAAGAGCAGTCAGAATTCGACCTCTGTGGGTTTCAAGTTGATGTTAGCCAAGATAGTGCCAAAGCTTTTCTTGTCACTAAGTGAGGTTGGAGCTGATTGCGAGGAATTTAAGCATCTGAAAGATTTGTAG 3501 0.4165 MRATNTRSSVQSLSHILLLPHRRRLRLIPKHLVLFRKMGVQRHEALSEDNEPAENACASSSLNQSALASESANSNPSVNTESSEVNEPGDISYKKSNTLHIYRQDVVKNNISGMIGIVTEVAGDSDSDSDSSITDDENDSEDEDGDDEEGDDSNNASRNSESNGASGHCKTDALLADQLRVLWMDESESTQNFSDVEVVDRGFLHGDFVAAASDPTGQVGVVVDVNICVDLLAHDGYIIKDVSSKNLKRIRDFTVGDYVVLGHWLGRIDDVLDNVTVLFDDGSVCKVSKADPLNLKPISKNILEDGHFPYYPGQRIRASSSSVFKNSRWLSGLWKANRLEGTVTKVTVGSVFVYWIASAGYGPYSSTAPAEEQSPKNLKLLSCFAHANWQLGDWCLLPSSVLSSSASMDKGISKLELNDSANNELDSNQTGSGCDSEEATVEETNGNKDTMDLDPADVLEGNNGNDKSNPSRDSSSCSSSISVSKEPVHEAWPLHRKKIRKVVIRKDKRARKKEESFEKALLIANTRTKVDVAWQDGTIERELNSTSLIPIDNPGDHEFVSEQYVVEKTSDDGEDISEARRVGVVRSVNAKERTACVRWLKKVARAEDPREFDKEEVVSVYELEGHPDYDYCYGDVVVRLSPVSVCLETASVGESAEKSTQKTEESGIKMDVNIQTGETCVQFSDLSWVGNITDLKNGDIEVTWADGMVSTVGPQAIYVVGRDDDDESIAAGSEISDAASWETVNDDEMEVLEDSGEDIERENSSSVTSEAEESGENDFGRAAALSVPLAAFRFVTRLASGIFSRGPRNLDPIPLEINAECEHPSPVVNDESTSQKHIVIDGDNSGNKNERYEEVVSEATETLEACVALCRLRNEDAPATASCDNDTCSLKHFDITKDPSDHYFIGANGQSNNRKWLKKVQQDWSILQNNLPEDIYVRVYEDRMDLLRAVIVGPYGTPYQDGLFFFDFHLPPEYPDVPPSAYYHSGGWRINPNLYEEGKVCLSLLNTWTGRGNEVWDPKSSSILQVLVSLQGLVLNSKPYFNEAGYDKQVGTAEGEKNSLSYNENTFLLNCKTMMYLMRKPPKDFEVLIKEHFRRRGHNILKACDAYMKGYLIGSLTRDASASEKSSQNSTSVGFKLMLAKIVPKLFLSLSEVGADCEEFKHLKDL 1166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00201 1166 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 915 1075 IPR000608 -
Pumo3g00201 1166 MobiDBLite consensus disorder prediction 419 440 - -
Pumo3g00201 1166 MobiDBLite consensus disorder prediction 45 91 - -
Pumo3g00201 1166 PANTHER (E3-INDEPENDENT) E2 UBIQUITIN-CONJUGATING ENZYME 120 1157 - -
Pumo3g00201 1166 SMART ubc_7 918 1075 - -
Pumo3g00201 1166 Pfam Ubiquitin-conjugating enzyme 920 1064 IPR000608 -
Pumo3g00201 1166 MobiDBLite consensus disorder prediction 53 91 - -
Pumo3g00201 1166 CDD UBCc 918 1068 IPR000608 -
Pumo3g00201 1166 FunFam Probable ubiquitin-conjugating enzyme E2 23 880 1154 - -
Pumo3g00201 1166 SUPERFAMILY UBC-like 896 1082 IPR016135 -
Pumo3g00201 1166 MobiDBLite consensus disorder prediction 419 484 - -
Pumo3g00201 1166 MobiDBLite consensus disorder prediction 129 151 - -
Pumo3g00201 1166 MobiDBLite consensus disorder prediction 462 484 - -
Pumo3g00201 1166 MobiDBLite consensus disorder prediction 441 455 - -
Pumo3g00201 1166 Gene3D Ubiquitin Conjugating Enzyme 884 1148 IPR016135 -
Pumo3g00201 1166 MobiDBLite consensus disorder prediction 120 169 - -
Pumo3g00201 1166 MobiDBLite consensus disorder prediction 753 777 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00201 Pumo-Chr3 2584578 2594456 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00201 200 400 Miscellaneous Gene Families AT2G33770 41.089 4.11e-48 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00201 K10581 - gmx:100809513 2037.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g00201 3 2584578 2594456 Pumo3g00201 3 2584578 2594456 ECH