Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00199 ATGCAGGCTGACATGACACTACGAAAAGATTATAAGGAAGTACGGTTTTCTGAAAAAACTGAAGCAAAAGATCTGAAGAACAAAGCAGATATGGTTAAAAAGTTAATGGAGAAAGGTTATCGAGTGAAGTGCAAGGTATCAGGCAAGGAAAATCAGGACTTGACAGTATTATTTTCTCCTCTTCTTGCTCTGATAGAAGATGTCTGTATTGTGGAAAGTGGACCACATATGGCAAAAAAAGATGCATTTATGATTGTCAGACACATTAAGTACGGGCCATCTAAGAAAGGTGGGAAAAAATTGCAAAATGCTCCAAACGTTAAGACTCAGGAGGGTGATATGGAGACATCAACTGCCAATTCTAGTGATTCCATTGAATACGAGAGCCATGCAGAATCTGGGTTTGAAACGGAGGAAGAGGTGCTTTCTGATGGTAACAAGCTTTCTAAAAGTTCCAGGTCTGTATTTAGCAACAATGTGAACATGACTGCCTCTCCTAATAATCAAACAAATGCTGCTCCAGAAGCATCTCCTGTGTCCGAAAATAGGTATAGGAGAACTAATCATCATGGTGAGAATAACGTCGAATCTAATGCACAAGTGCCTCCTGCTGTGACTGAGAATAGGTACAAAAGAGCAGAGCCAAGAAGCAGATTCCAACAAACATCAAATAATACAGGTATGAACTATCAAGGTCCAGAAACAAGAGATGCATTCAGGTCGCCACCGTCGAATTGGAACCGGACAAGGCAAGCGCCGGTAAGTGTTAATGTTAATCCCAGAATAGAAAATAACAGGCAAGCTTTTACTCATCCTGGATCAAGACACTCAATGCCTTCCCATGAGAATATCCGCAATCCTCCTCCTAATGCTCCTAATACCCCTAGACCTGGTTATGGCAATTTTAGTGGTTCAAATGAGGGTATCCCCAGGCATCCTGGTGCTCCCAATACCCCAAGATCTTCTAGTTATGGCAATTTTAGTGGTCCAAATGAGGGTATCCCCAGGCATCCTGGTGCTCCCAATACCCAAAGATCTTCTAGTTATGGCAGTTTCAGTGCTCCAAATGAGGCTATCCCCAAGCATCCTAGTGCTCCCAATACCCCAAGACCTTCTAGTTATGGCATGTTTAGTACTCCAAATGGCCCTGAGACACACGGTGTAAAAGTAGGGATGCATAGGAATAGAGAAGGGAATCAGTAA 1203 0.4256 MQADMTLRKDYKEVRFSEKTEAKDLKNKADMVKKLMEKGYRVKCKVSGKENQDLTVLFSPLLALIEDVCIVESGPHMAKKDAFMIVRHIKYGPSKKGGKKLQNAPNVKTQEGDMETSTANSSDSIEYESHAESGFETEEEVLSDGNKLSKSSRSVFSNNVNMTASPNNQTNAAPEASPVSENRYRRTNHHGENNVESNAQVPPAVTENRYKRAEPRSRFQQTSNNTGMNYQGPETRDAFRSPPSNWNRTRQAPVSVNVNPRIENNRQAFTHPGSRHSMPSHENIRNPPPNAPNTPRPGYGNFSGSNEGIPRHPGAPNTPRSSSYGNFSGPNEGIPRHPGAPNTQRSSSYGSFSAPNEAIPKHPSAPNTPRPSSYGMFSTPNGPETHGVKVGMHRNREGNQ 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00199 400 MobiDBLite consensus disorder prediction 129 146 - -
Pumo3g00199 400 MobiDBLite consensus disorder prediction 103 128 - -
Pumo3g00199 400 FunFam Translation initiation factor 3 (IF-3) family protein 7 97 - -
Pumo3g00199 400 MobiDBLite consensus disorder prediction 93 400 - -
Pumo3g00199 400 MobiDBLite consensus disorder prediction 340 354 - -
Pumo3g00199 400 MobiDBLite consensus disorder prediction 147 177 - -
Pumo3g00199 400 SUPERFAMILY Translation initiation factor IF3, C-terminal domain 11 90 IPR036788 GO:0006413
Pumo3g00199 400 Gene3D - 8 94 IPR036788 GO:0006413
Pumo3g00199 400 MobiDBLite consensus disorder prediction 217 284 - -
Pumo3g00199 400 PANTHER TRANSLATION INITIATION FACTOR IF-3 5 124 IPR001288 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00199 Pumo-Chr3 2529395 2535276 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00199 K02520 - gmx:100306622 712.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g00199 3 2529395 2535276 Pumo3g00199 3 2529395 2535276 ECH