Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00196 ATGGGATGTGTTGCCTCCAAACTAGAGGAAGAAGAGGAAGTGGTAGCTATTTGTAGAGAGAGAAAGCGGCTGTTAAAGCTAGCTGTGGAGAAAAGATATGCACTTGCTGAGGCTCATTGTAAGTATTTTCACTCTCTCAATGCAGTTGCTGCGGCCATTAAGCTCTTCGTTGCTCGCCACTCTTCACCTTCATCACCTTTCCTCATAACTTTCCCTCCTCCTTGCCCTTCTTCTCCTTCTCCACCCACTGAGAATGTTATAACCAACCCCATGTTCCTCCAGCAGACACCCTCAGAAACCAAGCATGAAGCCATTGCTTGTGACTCATGCATTTCCTCAACAACCTCAGAGTCTACTGAGGAAGAGGGTGAAGAAAAAAGGGAAGGAGAAGATGAAGGTAAGGGAGAAGAAGAGCAACATGAACAGCCATGTGGGTACTATTGCATGCCTATGACTATGCCTATGTCCATGTCCATGTCTATGCCTATGCCACCTTCAATGCCATCCCCACAGAGAGATTTTGGATGGGACTTCTTCTACCCTTTTGACAGTATGAGGAGTGACGTTATGAGTGGCTACCACAGGAACTCAGATGATGATTTGAGGGCAGTGAGGGAGGAAGAGGGGATTCCTGAGTTAGAGGAAGAAGTGGAGAGAGAGGAGGTTGAACACAAAGTGGTGAGTGTTGAGGAGAATAATAATAATAATAACAATAATAATGAAGGTGTTGTTGAGCAAGTGATGAGTGGTGTTGAAACAGTGAAGGTGGTGGATGTGGCCACTGAAAACCAAGGGGAGCAAAGGGGGCTTGCAGTTCTTGATACACCAGCAGCGGGGAGAGAGTTGCTTGAAGCTCTGAAAGACATTGAGGACCATTTTCTCAGGGCTTATGATTCTGGTAAGGATGTAACCAGAATGCTGGAAGCTAATAGAATCCCCCTTCATTCTAGTTTGGATGAAATCAAAGAAAGTTCGACTAAACTCATTCATGCAATAACATGGAAGTCCATTTCATCTAGGCAATCATCATGCAAGAGTCTCATGGTTCCAAATATGAAAAATTCTTCAACTTGGGTGGAATATAAGAATGATCTGTTTGATGATTATGGAGGAATGGATTCAGGAAGTCATTTGTTAACCTTAGGAAGGTTATATGCATGGGAAAAGAAACTGTTTGAGGAGGTTAAGGCTGGAGATAGCACACGGAAAAATTATGAAAAAAAATGTGCACAGTTGAGAAATAAGAATGTCAGAGGAGATGATCTACTAAGCACAGACAAAACAAAAGCTGAAGTGAAAGATCTGTATGCTGGGATCTTGGTTGCAATTCGACGTGCAGAGTCAATCTCAAAGAGAATTGAGAAAATGAGAGATGAAGAATTACAACCTCAAATTGTTGAACTATTAAAAGGCCTGACTCAGTCTTGGAAAATCATGTTGGAGTCCCATGAAACCCAGAAGAAGATTCTATCTGAAGTCAAGTACTTCACATGCGCCACGTACGGGAAATTCTGCAATCAATCTCATGGATTTGCAACTCTTCAGCTAGAAGCTCAGCTTCAAAATTGGCGTGACTGCTTCAAAGAGTACACTGCAGCACAAAAAGCATATGTTGAAGCTCTCCATGGATGGCTGAATAAGTTCATAGTCCCTGAAGTTGAGTTTTACTCAAGAAGCAAAAATGTTGCCATGCCATACCAAGTCAACGGGCCACCGCTACTGGTGATATGCAATGATTGGTTAGCTTCCCTGCAAAAGTTACCCGATAAAATGGTAACACTTGCATTGAAAAGTTTTGTGAAGGATGTTAGAGCTTTGTGGCTTCAGCAAAACAAAGAGCAACAGCAGAAAAGGAGGGTAGACAGGTTAACAAGAGATTTGGACAGAAGATATTCTTCAGGATCACATAAAGTGGAGACTAAGATGCTCGAATTGCATGTCACAGACCGCGAATCAGAGGCAGAAACTGATCAACAAGAGGAATGCTTGATGGAGAAGGGTGATCATTTGGAGACACTGAGAAGAAAACTGGAGGTGGAGAAGGAGAAGCACCACAGTTGCATGCAAGAAACACAGAGGATCACTTTACATGGATTGCAATCTGGGTTTTCTCTAGTCTTTGATTCATTGACAGAGTTCTCCAAAGCATCACAAAAAATGTACAATGGTCTTGTAACTTATAGTGAAAATAGTGTCAAGGTTGGGAACATTGCGTACATAGAGGGTGGCCGCAATGTTGAAAATTGCAACAGCCAAAACGGACAATAG 2268 0.4264 MGCVASKLEEEEEVVAICRERKRLLKLAVEKRYALAEAHCKYFHSLNAVAAAIKLFVARHSSPSSPFLITFPPPCPSSPSPPTENVITNPMFLQQTPSETKHEAIACDSCISSTTSESTEEEGEEKREGEDEGKGEEEQHEQPCGYYCMPMTMPMSMSMSMPMPPSMPSPQRDFGWDFFYPFDSMRSDVMSGYHRNSDDDLRAVREEEGIPELEEEVEREEVEHKVVSVEENNNNNNNNNEGVVEQVMSGVETVKVVDVATENQGEQRGLAVLDTPAAGRELLEALKDIEDHFLRAYDSGKDVTRMLEANRIPLHSSLDEIKESSTKLIHAITWKSISSRQSSCKSLMVPNMKNSSTWVEYKNDLFDDYGGMDSGSHLLTLGRLYAWEKKLFEEVKAGDSTRKNYEKKCAQLRNKNVRGDDLLSTDKTKAEVKDLYAGILVAIRRAESISKRIEKMRDEELQPQIVELLKGLTQSWKIMLESHETQKKILSEVKYFTCATYGKFCNQSHGFATLQLEAQLQNWRDCFKEYTAAQKAYVEALHGWLNKFIVPEVEFYSRSKNVAMPYQVNGPPLLVICNDWLASLQKLPDKMVTLALKSFVKDVRALWLQQNKEQQQKRRVDRLTRDLDRRYSSGSHKVETKMLELHVTDRESEAETDQQEECLMEKGDHLETLRRKLEVEKEKHHSCMQETQRITLHGLQSGFSLVFDSLTEFSKASQKMYNGLVTYSENSVKVGNIAYIEGGRNVENCNSQNGQ 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00196 755 Pfam Protein of unknown function (DUF630) 1 60 IPR006868 -
Pumo3g00196 755 Coils Coil 670 690 - -
Pumo3g00196 755 Pfam Protein of unknown function (DUF632) 282 604 IPR006867 -
Pumo3g00196 755 Coils Coil 203 239 - -
Pumo3g00196 755 PANTHER UNCHARACTERIZED 1 729 - -
Pumo3g00196 755 MobiDBLite consensus disorder prediction 108 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00196 Pumo-Chr3 2462962 2467898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00196 1 627 Acyl Lipid Metabolism Gene Families AT2G27090 29.817 2.89e-62 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00196 - - gmx:100807897 1218.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g00196 3 2462962 2467898 Pumo3g00196 3 2462962 2467898 ECH