Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00191 ATGGGCAGCCAGAAAGTGTCACCATCAACAAGCAGCCCAAAGAAAAACTCAAGAACAACACTCCATGATATGTTTTTGCAGGAGAGTCCTCATTTCACCATCCCATCTTCTCCTACAGGAAATGAAGAACTTCTCTCCACTATTTCTTACTGCACCTTTGTTTTCACCTTCACTGACCCTTCAGAATCTCCCGCACAAAGAGACGCAAAGAGGCTTCAACTCACACGACTAGTCTCTATATTGAAGTCCTCCAAGAAGCCAGTGCATGAAAAAGTTTTGGGGCCTCTAGTGGCCATGATCTCAGCCAACCTCTTAAGGCCACTCCCTCCACCTTCCAACCCTTGTTCCATTACAGACTTGGCTGAAGAAGAAGATCCCATCTCTATATTTTCACCCCTATGGTCACATCTCCAAATAGTTTATGAGATTCTTCTCAAGCTTGTTAACAGCACAGACCAAAAAGTACTGAGAGAGTGGATGGATCATTCTTTCCTCCGCAATCTCCTAGCTCTTTTCCAGTCTGAGGATCCAAGGGAACGCGAGAGTTTGAAAAATGTGTACCACAAGATATATTCCAGGTTCGTTTCTGATCGTTCCTTCATGAGGAAATCAATGACCGAGGTGCTCTTGAACTATGTGTTTGAGACAGAGAAGCATCCCGGTATTGCCGACTTGCTTGAGATATGGGGAACCATAATCAATGGCTTTACCGTGCCACTCAAGGAAGAGCACAAGCTGTTCCTCATGAGAGTGCTCATTCCTCTACACAAGACCAAGGGGATGCAAGTGTACCACAGGCAATTGGCTTATTGTGTGTCACAGTTTGTGCAGAAGGAGCCTATGCTTGGAGGGGTTGTTGTTAGAGGGATTTTGAGGTACTGGCCTGTCACAAACTGTCAAAAAGAAATCTTGCTAATTGGGGAGTTGGAAGATCTGGTGGACAATTTAGACCCTGACCAGTATCGTAAGTTGGCCTTGCCCTTGTGTACCCAGATCACAAAATGCATAAACAGTTGGAATTCCCAGGTAGCCGAGCGTGCCCTCTATGTGTGGAACAATGAGCAGTTCGTGAAAATGGCATTAATAGGAACGGTGGAAGTATTTACTGTGATTGTAGAAGGCATGGAAAAGAACCTGAAGTGGCATTGGAGCAAGAGCGTGAGGCAACTAACAGAGAGTGTGAAGGTGATGCTGGAAGAAATGGATCCAGATCTGTATTCCAAGGGTCTCATGGACATGGAAGCTAAAGAATCAATGGCACATCAAGAAGATATCAAGAGAAAAAAGAGATGGGAAAGAATAGAATTGGAAGCTGCCAAGAATCAGTTTCTCAATCCACAACGTTATATACGTGTCTCCTACTAA 1365 0.4462 MGSQKVSPSTSSPKKNSRTTLHDMFLQESPHFTIPSSPTGNEELLSTISYCTFVFTFTDPSESPAQRDAKRLQLTRLVSILKSSKKPVHEKVLGPLVAMISANLLRPLPPPSNPCSITDLAEEEDPISIFSPLWSHLQIVYEILLKLVNSTDQKVLREWMDHSFLRNLLALFQSEDPRERESLKNVYHKIYSRFVSDRSFMRKSMTEVLLNYVFETEKHPGIADLLEIWGTIINGFTVPLKEEHKLFLMRVLIPLHKTKGMQVYHRQLAYCVSQFVQKEPMLGGVVVRGILRYWPVTNCQKEILLIGELEDLVDNLDPDQYRKLALPLCTQITKCINSWNSQVAERALYVWNNEQFVKMALIGTVEVFTVIVEGMEKNLKWHWSKSVRQLTESVKVMLEEMDPDLYSKGLMDMEAKESMAHQEDIKRKKRWERIELEAAKNQFLNPQRYIRVSY 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00191 454 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 30 438 IPR002554 GO:0000159|GO:0007165|GO:0019888
Pumo3g00191 454 PIRSF PP2A_B56 2 452 IPR002554 GO:0000159|GO:0007165|GO:0019888
Pumo3g00191 454 FunFam Serine/threonine protein phosphatase 2A regulatory subunit 37 436 - -
Pumo3g00191 454 Gene3D - 39 436 IPR011989 -
Pumo3g00191 454 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 18 441 IPR002554 GO:0000159|GO:0007165|GO:0019888
Pumo3g00191 454 SUPERFAMILY ARM repeat 42 416 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00191 Pumo-Chr3 2402251 2404049 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00191 K11584 - gmx:100802007 836.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g00191 3 2402251 2404049 Pumo3g00191 3 2402251 2404049 ECH