Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00188 ATGGAGGGATTAGGAGGACTGAGCCACCTTTTTGTGACAATGTTTCTAACGGGCTTTGGCGGTGTCATAGTTCTTCCGGCAATAACCGACATTACCATGGCTGCACTTTGCCCTGGTCAAGATCAGTGTTCCCTTGCCATTTACCTCTCTGGATTCCAACAAGCTATGGCTGGAGTGGGGTCAGTGGTGATGACACCATTAATAGGAAACTTGTCGGACAGATATGGCAGGAAAGCGTTGATCACACTTCCTCTCACAATCTCTGTCATTCCTCAAGTGATATTGGCATATAGCAGGGATACCAAATTCTTCTATGCGTACTATGTGGTGAAAACTCTTGCTGCCATGGCAGGCGAAGGGAGCTTCCATTGCCTGGCTCTTGCATATGTGGCAGACAAGGTTCCAGATGGGAAAAGAACATCAGCATTCGGAATACTTGCTGGTGTTGGATCAGCATCATTCGTTGGTGGAACATTAGCCGCTCGTTTTCTATCCACTGCTTTAACATTTCAGGTTGCTTCAGTCTTGTCAATGATTGCATTGGTGTACATGAGAATTTTCCTAAAGGATAGTGTACCTGGTGGTGCCATGACACAGCCGTTATTGAAAGAGGTCGAGGAACCATGTGCTGAGGATGATGATGATTCATCACCAAGGGCAACAGGAACATTTAAGAAACTTCCCTCAATGGGGGATTTGATTTGTTTGCTCAAGTGTAGTCCCACATTCTCGCAAGCAGCTATTGTTTCGTTCTTCAATAGTCTTGCAGATGGTGGTTTGATGGCTGTATTGCTGTATTATTTAAAGGCACGTTTTCAATTCAACAAGAACCAGTTTGCTGATTTGTTGATGATTACTGGGATTGGAGCCACTCTTGCACAACTATTTTTCATGCCCATTTTAGTGCCTCTAATAGGAGAGGAGAAGCTGCTCTCCACAGGGCTCTTAATTAGCTGCATAAATGTATCTGTCTACAGCGTAGCATGGTCAGGATGGGTTCCTTATGCTCTAGCAGGTTGCTCTGTGTTTGCAGTTTTTGTGCGCCCAAGTTTATGCAGCATTGCATCGAAGCAAGTTGGACCTACTGAACAGGGAATGGTTCAAGGATGTCTTTCAGCAATTAGTTCCTTCGCCAACATCATTGCTCCATTAATTTTCAGTCCACTGACAGCCTTATTCTTGTCAGAAGAAGCACCGTTTTATTTTCCTGGCTTCAGTCTAATGTGCCTTGGGGTAGCACTGATGGTAGCATTTTTTCAGAGTCTAATGATCCGTGCTGTTCCTCCTATTGCGGGTGGCAAAATTAGCAGTAACCGCTGCACGGATACCTTGGTCTGA 1338 0.4499 MEGLGGLSHLFVTMFLTGFGGVIVLPAITDITMAALCPGQDQCSLAIYLSGFQQAMAGVGSVVMTPLIGNLSDRYGRKALITLPLTISVIPQVILAYSRDTKFFYAYYVVKTLAAMAGEGSFHCLALAYVADKVPDGKRTSAFGILAGVGSASFVGGTLAARFLSTALTFQVASVLSMIALVYMRIFLKDSVPGGAMTQPLLKEVEEPCAEDDDDSSPRATGTFKKLPSMGDLICLLKCSPTFSQAAIVSFFNSLADGGLMAVLLYYLKARFQFNKNQFADLLMITGIGATLAQLFFMPILVPLIGEEKLLSTGLLISCINVSVYSVAWSGWVPYALAGCSVFAVFVRPSLCSIASKQVGPTEQGMVQGCLSAISSFANIIAPLIFSPLTALFLSEEAPFYFPGFSLMCLGVALMVAFFQSLMIRAVPPIAGGKISSNRCTDTLV 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00188 445 SUPERFAMILY MFS general substrate transporter 10 419 IPR036259 -
Pumo3g00188 445 Coils Coil 444 445 - -
Pumo3g00188 445 CDD MFS_SLC46_TetA_like 10 423 - -
Pumo3g00188 445 Gene3D MFS general substrate transporter like domains 7 436 IPR036259 -
Pumo3g00188 445 Pfam Major Facilitator Superfamily 10 194 IPR011701 GO:0022857|GO:0055085
Pumo3g00188 445 ProSiteProfiles Major facilitator superfamily (MFS) profile. 6 424 IPR020846 GO:0022857
Pumo3g00188 445 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 6 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00188 Pumo-Chr3 2377344 2384257 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00188 2 428 Organic Solute Cotransporters AT2G16990 46.804 1.57e-128 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00188 - - gmx:100805770 835.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g00188 3 2377344 2384257 Pumo3g00188 3 2377344 2384257 ECH