Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00183 ATGATGCCCCTGGGAATTATAATGCCAATTCAGCAATCTCTTACTGTTAATCTTCCAACATATGATGGGAATCTGGGTGATTCACGTGTGTCTAATATCTTTTCTGCCACAGATCTTCCTACTATATCAGGCATTGCTGACGAGGCAGAAATTCTTTCTTCTCTTCAGCGGCCTAAGAAAATCATTCTATTAGGCAGTGATGGTCTTGAGCACCCATTTCTTTGCAAACCGAAGGATGACCTCCGCAAAGATGCTCGCATGATGGAGTTCACTGCAATGATCAACAGATTGCTATCCAAATATCCTGAGAGTCGTCGAAGGAAGCTCTATATTCGAACATTTGCTGTGATTCCTCTGACAGAGGACTGTGGCATGGTAGAGTGGGTGCCCCACACTCGTGGACTTCGACAAATTCTTCAAGACATATATATTACATGTGGAAAATTTGATAGGCAGAAAACTAATCCTCAAATTAAACAAATTTATGATCAATGTCAAGGTAAAATGCCAGAGGACAAGATGCTACAGAACAAAATCCTTCCAATGTTTCCTCCTGTTTTCCATAAATGGTTCCTGACAACATTTTCAGAGCCTGCTGCATGGTTCAGGGCCCGTGTTGCTTATGCTCACACAACTGCAGTTTGGTCCATGGTTGGGCATATTGTGGGGCTGGGTGACCGGCATGGTGAAAACATTCTTTTTGATTCTACCAGTGGTGATTGTGTTCATGTTGATTTCAGTTGCTTATTTGACAAAGGCTTGCAGTTGGAGAAGCCCGAGCTTGTTCCTTTTAGGCTAACCCAGAACATGATTGACGGCTTAGGTATCACTGGATATGAGGGTATCTTCTTGAGGGTTTGTGAAATTACACTTTCGGTACTGAGGACGCACAGGGAGACTCTCATGAGCGTGCTTGAAACTTTCATCCATGATCCTCTTGTGGAGTGGACAAAATCTCACAAGTCCAGTGGTGTAGAAGTGCAGAATCCACATGCAAAGAGAGCAATTAGTAATATTGAGGCAAGGTTACAAGGAGTGGTTGTTGGTGTTGGAGCTGCGCCATCATTGCCTCTTGCTGTAGAAGGTCAAGCTCGTAGACTAATTGCTGAAGCAGTCTCTCACAAGAATCTTGGAAAGATGTATATATGGTGGATGCCTTGGTTTTGA 1167 0.4336 MMPLGIIMPIQQSLTVNLPTYDGNLGDSRVSNIFSATDLPTISGIADEAEILSSLQRPKKIILLGSDGLEHPFLCKPKDDLRKDARMMEFTAMINRLLSKYPESRRRKLYIRTFAVIPLTEDCGMVEWVPHTRGLRQILQDIYITCGKFDRQKTNPQIKQIYDQCQGKMPEDKMLQNKILPMFPPVFHKWFLTTFSEPAAWFRARVAYAHTTAVWSMVGHIVGLGDRHGENILFDSTSGDCVHVDFSCLFDKGLQLEKPELVPFRLTQNMIDGLGITGYEGIFLRVCEITLSVLRTHRETLMSVLETFIHDPLVEWTKSHKSSGVEVQNPHAKRAISNIEARLQGVVVGVGAAPSLPLAVEGQARRLIAEAVSHKNLGKMYIWWMPWF 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00183 388 FunFam Serine/threonine-protein kinase ATR 184 346 - -
Pumo3g00183 388 SUPERFAMILY Protein kinase-like (PK-like) 37 320 IPR011009 -
Pumo3g00183 388 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 45 358 IPR000403 -
Pumo3g00183 388 CDD PIKKc_ATR 42 318 - -
Pumo3g00183 388 Gene3D - 184 346 IPR036940 -
Pumo3g00183 388 Pfam FATC domain 357 388 IPR003152 GO:0005515
Pumo3g00183 388 SMART pi3k_hr1_6 72 377 IPR000403 -
Pumo3g00183 388 Pfam Phosphatidylinositol 3- and 4-kinase 72 317 IPR000403 -
Pumo3g00183 388 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 2. 211 231 IPR018936 GO:0016301
Pumo3g00183 388 PANTHER ATAXIA TELANGIECTASIA MUTATED ATM -RELATED 5 387 - -
Pumo3g00183 388 SMART FATC_2 356 388 IPR003152 GO:0005515
Pumo3g00183 388 ProSiteProfiles FATC domain profile. 356 388 IPR003152 GO:0005515
Pumo3g00183 388 FunFam Serine/threonine-protein kinase ATR 9 129 - -
Pumo3g00183 388 Gene3D - 26 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00183 Pumo-Chr3 2346804 2349331 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00183 K06640 - gmx:100804117 782.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g00183 3 2346804 2349331 Pumo3g00183 3 2346804 2349331 ECH