Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00014 ATGAAGAGGTCTCTGAGAAAGTTGGGAGTTCTGGCAGTAGAGAAGCATGAGCGTGACCGCAGAAACATTATGCCTTTGTCCCAGTTAGAGGAGCTCGCTCAGGCTACCCAGGACATGCAAGACATGAGAGACTGCTACGATAGCTTGCTTTCCGCGGCAGCAGCGGCCGCCAACAGTGCTTATGAATTCTCAGAGTCCTTGGGAGAATTGGGCTCTTGCCTTCTTGAGAAAACCGCCTTGCATGACGACGAAGAAAGCGGCAAAGTTCTCATAATGCTCGGTAAATTGCAGTTTCAACTCCTGAAGCTTATTGATAACTATCGCTCTCATATCACCCAGACAATTACCATTCCTTCAGACTCTCTTCTCAATGAACTTCGAATTGTTGAGGAGATGAAGCGACATTGTGATGAAAAAAGAGAAGTATATGAGTCCATGTTAACAAGATATAGAGAAAGAGGTAGGTCTAGAAGCGGAAAAGCAGAGAGTATTTCCTTGCAGCAGTTGCAAATTGCTTGTGATGAATATGATGAGGAGGCTACATTATTTGTTTTCCGCTTGAAATCTCTGAAGCAAGGGCAATCGTGGAGCCTTCTAACACAGGCAGCACGTCACCATGCAGCTCAGTTGTGTTTCTTCAAGAAAGCAGTTAAGTCTCTTGAGACAGCAGAGCCTCATGTAGAATCAGTAACAGAACAGCATCACATTGATTACCACTTCATTGGTATTGAAGGAGAGGATGAGGATGAAGATGAAGATGATGATGTAGATCGTGATGATGATAGTCATGATGAGAATGATGATGGGGAGCTGAGTTTTGACTATGCACAAAATGAACACGAACAAGATGTTTCTACATTAGAGAACTCAATGAAGGAAAACTTGGATAGGCTTCGCAGGAATTCATTCTCCTTCAGGGTTAGGTCAGCGAGCCAATCTGCCCCACTTTTTGCTGATAATAAGCGTGATTCTAGTGAAAAGCTGAGACAGATGCGGCCAACTTTATCACGGAAGTTCAATTCATATGTGCTGCCTACACCAGTTGATGCGAAGAGTTCAATATCTTTGAGGTCAAGTAATCAAGTACCTTCGAAAATAAAGACAAATTTAAATGAGCCTATGAAGAATTTATGGCATTCATCCCCACTGGAACAAAAGAAATATGAAAACATTTTTGGAGATGGGGGATTTTCTGGTCCTAATGTTAGGACTGCACAGTCTGTACTCAAGGAGAGTAACAGCAATACTGCCTACTCAAGATTGCCACCTCCTTTAATTGATGGTAATTTATCCTCAAATCATGATTTTGTTACCGCTTACTCTAAAAAGATTAAAAGACATGCTTTTTCTGGTCCATTGGTAAGTAATGCATGGCCAACCAAGCCTGTCTCGGTAGAAAGTGTCCAATTGTTTTCTGGACCTCTTTTACGGACATCAATTCCTCAGCCTCCATCATCATCTTCAAAAGTATCTCGTAGTGCTTCTCCCCCTCTTTCATCTTCACCTAAAATAAATGAGCTTCATGAACTTCCAAGGCCTCCAACCATTTCCCCATCCAATTCTAAGCTTTTAGGTTTGGTGGGTCATTCAGGTCCATTGGTGTCCCGAGGTCAACAACTTTCTGCTCCAAATAATTTGGTTACATCAAATGCAGCATCTCCATTGCCAATGCCTCCTCTAGCCATGGCTCGAAGTTTCTCCATACCTTCTAGTGGTGCTAAAGTTGCAGCATTACATGTGTCAAGACCACTAGAAGACCCTAACAAATCAACAATATCCGAGGATATTGATTCTCCTTCTCTGATGCAAATTGCTTTATCTACTTGTCACCCATCATCAGATGGCTCTGACACTGTTGCTCAGGCTGTCTAG 1872 0.4263 MKRSLRKLGVLAVEKHERDRRNIMPLSQLEELAQATQDMQDMRDCYDSLLSAAAAAANSAYEFSESLGELGSCLLEKTALHDDEESGKVLIMLGKLQFQLLKLIDNYRSHITQTITIPSDSLLNELRIVEEMKRHCDEKREVYESMLTRYRERGRSRSGKAESISLQQLQIACDEYDEEATLFVFRLKSLKQGQSWSLLTQAARHHAAQLCFFKKAVKSLETAEPHVESVTEQHHIDYHFIGIEGEDEDEDEDDDVDRDDDSHDENDDGELSFDYAQNEHEQDVSTLENSMKENLDRLRRNSFSFRVRSASQSAPLFADNKRDSSEKLRQMRPTLSRKFNSYVLPTPVDAKSSISLRSSNQVPSKIKTNLNEPMKNLWHSSPLEQKKYENIFGDGGFSGPNVRTAQSVLKESNSNTAYSRLPPPLIDGNLSSNHDFVTAYSKKIKRHAFSGPLVSNAWPTKPVSVESVQLFSGPLLRTSIPQPPSSSSKVSRSASPPLSSSPKINELHELPRPPTISPSNSKLLGLVGHSGPLVSRGQQLSAPNNLVTSNAASPLPMPPLAMARSFSIPSSGAKVAALHVSRPLEDPNKSTISEDIDSPSLMQIALSTCHPSSDGSDTVAQAV 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00014 623 MobiDBLite consensus disorder prediction 477 502 - -
Pumo3g00014 623 MobiDBLite consensus disorder prediction 477 523 - -
Pumo3g00014 623 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 621 IPR037488 -
Pumo3g00014 623 Gene3D Arfaptin homology (AH) domain/BAR domain 26 241 IPR027267 -
Pumo3g00014 623 MobiDBLite consensus disorder prediction 244 268 - -
Pumo3g00014 623 CDD BAR 61 226 - -
Pumo3g00014 623 MobiDBLite consensus disorder prediction 244 271 - -
Pumo3g00014 623 SUPERFAMILY BAR/IMD domain-like 30 229 IPR027267 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00014 Pumo-Chr3 331547 336842 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00014 - - gmx:100784870 1034.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g00014 3 331547 336842 Pumo3g00014 3 331547 336842 ECH