Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01902 ATGGAAGGAGGTGTACCAGAAGCTGATATGTCTGCCTTCAGAGAATGTTTGTCTCTCTCGTGGAAGAATCCTTATGTTCTTCGCCTTGCTTTCTCTGCTGGAATTGGAGGCCTTCTCTTTGGTTATGACACTGGAGTTATATCTGGGGCTCTTTTGTATATCAGGGATGATTTCAAGGCAGTTGATAGGAAGACTTGGCTTCAGGAAGCCATAGTGAGTACTGCAATAGCTGGAGCAATCATAGGAGCTTCAGTTGGAGGATGGATCAACGATCGATTTGGAAGAAAGAAAGGGATTGTTTTAGCAGATACCCTCTTTTTTATTGGGGCTGTTATCATGGCTGCTGCTCCAAGCCCAGCTATTCTCATTGTCGGTCGTGTACTTGTTGGCATTGGTGTTGGTATGGCTTCAATGGCATCACCCCTCTACATTTCAGAGGCTTCACCAACAAGAGTAAGAGGTGCCCTTGTGAGCCTTAACAGTTTTCTCATCACTGGAGGACAGTTCTTATCCTACCTCATCAACTTGGCCTTCACCAAGGCACCAGAGCCATGGAGGTGGATGTTAGGGATAGCAGCAGTGCCAGCTTTGATACAAATTGTACTAATGCTGACACTCCCAGAATCGCCTCGTTGGCTGTACCGCAAGGGTAAGGAAGAGGAAGCAAAATCGATTCTAAAAAAGATCTACCCGCCACATGAAGTTGAAGGCGAAATTCAGGCTTTGAAGGAATCAGTTGATATGGAAATCAAGGAAGCAGAATCATCAGAGAAGATCAACATAATCAAACTTTTGAGAACTTCAGCTGTGAGAAGAGGTTTATATGCAGGCATGGGCCTCCTAATCTTCCAGCAGTTTGTGGGAATCAACACTGTGATGTATTATAGTCCCACCATTGTTCAGTTAGCTGGTTTTGCATCTAACAGAACAGCACTGCTTCTGTCACTCATCACATCTGGCCTGAATGCATTTGGTTCAATTCTGAGCATTTACTTCATTGACAAGACTGGGAGGAAAAAGCTTGCTCTAATCAGTTTGTGTGGTGTTGTGTTCTCTTTGGCTCTCTTAACTGTCGCGTTTCGCGAAAGTGAAATCCACTCCCCAATGGTCAGTGCCATTGAAACCTCTCAATTCAACAACACCTGCCCTGATTACAAAACAGCAGTGAACCCTCATGAATGGACCTGCATGACATGCCTAAAGGCCTCACCATCTTGTGGCTTTTGTGCTGCTGATGACAAGGTAAATATATTCAACCCTTTTCATTTTACCAACCTCATGTTTCAATTTTGCTTTTCAATTATTGGGAGGGAAGGGATAGGAAACAAGTTATTTCAATTCCAAATTTGGACACCATTATACATATAG 1368 0.4371 MEGGVPEADMSAFRECLSLSWKNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDDFKAVDRKTWLQEAIVSTAIAGAIIGASVGGWINDRFGRKKGIVLADTLFFIGAVIMAAAPSPAILIVGRVLVGIGVGMASMASPLYISEASPTRVRGALVSLNSFLITGGQFLSYLINLAFTKAPEPWRWMLGIAAVPALIQIVLMLTLPESPRWLYRKGKEEEAKSILKKIYPPHEVEGEIQALKESVDMEIKEAESSEKINIIKLLRTSAVRRGLYAGMGLLIFQQFVGINTVMYYSPTIVQLAGFASNRTALLLSLITSGLNAFGSILSIYFIDKTGRKKLALISLCGVVFSLALLTVAFRESEIHSPMVSAIETSQFNNTCPDYKTAVNPHEWTCMTCLKASPSCGFCAADDKVNIFNPFHFTNLMFQFCFSIIGREGIGNKLFQFQIWTPLYI 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01902 455 PRINTS Sugar transporter signature 37 47 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pumo2g01902 455 PRINTS Sugar transporter signature 284 294 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pumo2g01902 455 PRINTS Sugar transporter signature 123 142 IPR003663 GO:0016020|GO:0022857|GO:0055085
Pumo2g01902 455 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 10 391 - -
Pumo2g01902 455 SUPERFAMILY MFS general substrate transporter 18 359 IPR036259 -
Pumo2g01902 455 ProSiteProfiles Major facilitator superfamily (MFS) profile. 29 455 IPR020846 GO:0022857
Pumo2g01902 455 ProSitePatterns Sugar transport proteins signature 2. 128 153 IPR005829 GO:0016020|GO:0022857|GO:0055085
Pumo2g01902 455 FunFam Probable inositol transporter 2 20 381 - -
Pumo2g01902 455 Gene3D MFS general substrate transporter like domains 20 380 IPR036259 -
Pumo2g01902 455 Pfam Sugar (and other) transporter 30 360 IPR005828 GO:0016020|GO:0022857|GO:0055085
Pumo2g01902 455 NCBIfam sugar porter family MFS transporter 20 365 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01902 Pumo-Chr2 36401345 36405666 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01902 1 411 Organic Solute Cotransporters AT1G30220 72.289 0.0 598
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01902 K08150 - gmx:100796800 755.362