Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01898 ATGTGGCTGCCATTAGATACGCATGCAAGTTACATCATAGCCCTTAGAGCAACCAAAGGAACTCAGAAACTAGAGAGAGCAAAACATATTTTCATTTCATCTTTTTTTGAGTTCCAACAAATGGCAACCACTGTGATGACCACTCTCCCCCAATTCAGTGGTCTTAGACCCCAATTCTCAGCTGCTCCTGTGAAGAACTTGGTTGCTGTCCAACCCATGAGGCGCAAGGGGAAGGGTGCTTTGGGAGCTCGATGTGACTACATTGGTTCATCCACTAATCTGATTATGGTGGCTTCTACAACCTTGATGCTGTTTGCTGGAAGGTTTGGATTGGCTCCATCAGCAAACAGGAAAGCCACTGCAGGGCTAAAGCTGGAGGTGAGGGACTCAGGCTTGCAGACTGGTGACCCTGCTGGCTTCACCCTTGCTGACACCTTGGCCTGTGGATCTGTTGGCCACATCATTGGGGTTGGGGTTGTTCTTGGTCTTAAGAACATTGGTGCCCTGTAA 510 0.4863 MWLPLDTHASYIIALRATKGTQKLERAKHIFISSFFEFQQMATTVMTTLPQFSGLRPQFSAAPVKNLVAVQPMRRKGKGALGARCDYIGSSTNLIMVASTTLMLFAGRFGLAPSANRKATAGLKLEVRDSGLQTGDPAGFTLADTLACGSVGHIIGVGVVLGLKNIGAL 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01898 169 SUPERFAMILY Photosystem I reaction center subunit X, PsaK 137 163 IPR035982 GO:0009522|GO:0015979|GO:0016020
Pumo2g01898 169 Pfam Photosystem I psaG / psaK 91 167 IPR000549 GO:0009522|GO:0015979|GO:0016020
Pumo2g01898 169 ProSitePatterns Photosystem I psaG and psaK proteins signature. 139 156 IPR000549 GO:0009522|GO:0015979|GO:0016020
Pumo2g01898 169 NCBIfam photosystem I reaction center PsaK 87 169 IPR017493 -
Pumo2g01898 169 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT V, CHLOROPLASTIC-RELATED 42 168 IPR016370 -
Pumo2g01898 169 Gene3D - 86 169 IPR023618 GO:0009522|GO:0015979
Pumo2g01898 169 FunFam Photosystem I reaction center subunit psaK 86 169 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01898 K02698 - gmx:100527056 238.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01898 2 36359544 36361305 Pumo2g01898 2 36359544 36361305 ECH