Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01896 ATGGATCACCACGAGGATGAAAGTAACAGCAAACAAGACGATGAGGAAGCTGTTGCTCGCCTTGAGGAAATGAAGAAATCTATTGAGGCGAAGATGGCTTTACGTCAAAGCAATTTGAATCCTGAAAGGCCTGACTCAGGATTTTTAAGGACATTGGATTCCAGCATTAAGCGCAACACTGCAGTTATTAAGAAACTGAAGCAGATTAATGAAGAGCAGCGTGAAGCTTTGATGGACGAGTTGCGAAGTGTCAACTTAAGCAAATTTGTCAGTGAAGCCGTGGCCGCTATTTGTGATGCCAAGCTTAGAAGTTCTGATATACAAGCTGCAGTTCAGATCTGTTCTTTGCTTCATCAAAGGTACAAGGACTTTGCACCAAGCCTGATTCAAGGGCTTCTCAAAGTCTTTTCTCCTGGAAAACCTGGCGATGAATCAGATACAGACAGAAATTTGAAGGCAATGAAGAAGCGCAGCTCTCTGAAGCTTCTATTGGAACTTTTTTTTGTTGGAGTTATTGAAGATGGTGGCATTTTTATCAATATCATAAAAGATCTTACCAGTGGGGAACAGCTAAAAGATCGGGATGCTGCACAAACAAGTTTGACCCTTCTTTCTAGTTTTGCTCGCCAAGGGAGAATTTTTCTAGGACTGTCTGTTGGTGGGCCGGAAATTCATGAAGAGTTTTTTAAAGGTCTTAACATCACAGCAGATCAGAAGAAAGTTTTCCGGAAAGCATGCTATTCCTTTTATGATGCTGCAGCTGAACTACTTCAGTCTGAGCATTCTTCACTTCGCTTAATGGAGCATGAAAATTCCAAGATTTTGAATGCAAAAGGGGAGCTCAGTGATGAAAATGTTGCTTCATATGAAAAGCTTCGTAAATCCTATGACCATTTGTACCGTAACATCTCATCATTAGCAGAAGCCCTTGATATGCAGCCTCCTGTAATGCCAGAGGATGGCCACACAACTAGGGTTACCAGTGGTGAGGAGGGTATTTCCTCTGCTTCTGGTAAAGATACTTCTGTTGTTGAACCCGTATGGGATGATGAAGATACAAGGACTTTCTATGAATGTTTACCTGATCTTAGAGCTTTTGTTCCTGCTGTGCTTTTGGGAGAAATGGAGCCAAAAAGCAGTGAGCAATCTGCAAAGAATCAAGACCAAACAACTGAAATATTACCTGAATCAGACAAAGGTCAACAGACCACCCATGAAAGTGGAGAGGCCTCTACAGAGTCTAATGCTTTGCCAGAGGCAGAAAGCACAGAAAGAGTGAAGGATAAGGAGGAAAAAGACAAGTCTAAAGAATTGGACAGAGAGAAGGAAAAAGAAAAAGATAATGACAAAAAGGGAGAAAATGAAAAAGACAAACTCAGAAGTCTTGAAGGGACAAATTTGGATGCTCTACTGCAGAGGCTTCCGGGTTGTGTGAGCCGGGACCTTATAGATCAATTAACTGTGGAGTTCTGTTATCTAAATTCAAAATCAAATCGGAAAAAGCTTGTGAGGGCTTTGTTCAATGTACCAAGGACATCTCTGGAACTGTTACCGTATTATTCACGCATGGTTGCCACACTCTCAACTTGTATGAAGGATGTCTCCTCCATTCTTTTGCAGATGTTGGAGGAGGAATTCAACTTCTTAATAAATAAAAAGGATCAGATGAACATTGAGACAAAGATAAGGAACATCAGGTTCATTGGAGAACTTTGCAAGTTCAAAATTGCCCCTCCTGGTCTAGTCTTCAGTTGTTTGAAGGCCTGTTTAGATGATTTTACACATCACAACATTGATGTAGCTTGCAATCTTCTTGAAACATGTGGCCGTTTTCTGTATCGGTCTCCAGAAACTACTATACGTATGGCTAACATGTTGGAGATACTGATGCGCTTGAAAAATGTAAAAAACTTGGATCCAAGACATAGCACTTTGGTGGAGAATGCATACTACCTTTGCAAACCACCAGAAAGATCTGCACGAGTAGCTAAAGTTCGTCCTCCATTGCATCAGTATATCAGAAAATTGCTTTTCTCTGATCTTGATAAGTCTACCATTGAGCATGTGCTGAGGCAACTCCGTAAATTACCATGGAATGAATGTGAACCATATCTTTTGAAATGCTTCATGAAGGTCTACAAAGGCAAATATGGTCATATCCACCTGATAGCATCTCTTGCTGCTGGATTAAGTCGCTATCATGATGAGTTTGCTGTAGCTATCGTTGATGAGGTTCTGGAGGAGATTAGAGTTGGGCTGGAGTTAAATGACTATGGGATGCAGCAAAGACGCATTGCTTACATGCGATTCTTAGGGGAGCTTTACAACTATGAGCATGTAGACTCATCTGTTATTTTTGAGACACTATATCTCATTCTCATCTATGGCCATGGGACATCGGAGCAAGATGTACTCGATCCACCTGAAGATTGTTTTCGCATAAGGTTGATCATTACTCTGCTTGAAACTTGTGGGCATTACTTTGATCGTGGCTCTTCTAAGAGAAAACTTGATCGATTCCTAATACACTTCCAGAGGTATATTTTAAGCAAAGGGGCACTGCCTCTGGACATCGAATTTGACTTACAGGATCTGTTTGCGGACTTGCGTCCCAATATGGTTCGTTACACTTCTATTGAGGAAGTGAATGCAGCTCTAGTAGAACTCGAGGAACATGATCGAATAGTTTCTGCTGATAGGGCCAGTAGTGAAAAACATTCTGACACTGAGAAGCCTTCAGGTAGGACCACTTCCACTACTAAAGTGGTTGGCAATGGACAGAGCAATGATAATGGTACGGAGGAAAATGGAGTGCAAGATGATAATGACAGTGAGACTGATTCAGGGAGTGACACAATTGATGTGGAGGGACATGATGATGAAGAGTTGGATGAGGAGAATCATGATGATGGGTGTGAGACTGAGGATGACGACGATGACGATGACGACGGGCCTGGACCTGCTTCTGATGAGGAGGATGAAGTCCATGTGAGACAAAAAGTGACCGAGGTGGACCCTCTGGAAGAAGCCAATTTTGATCAGGAGCTCAAGGCTGTAGTACAGGAGAGTATGGAACAGCGAAGGCAGGAGCTACGAGGTCGTCCTACGTTGAACATGATGATTCCAATGAATGTATTTGAGGGATCTGCCAAGGATCACCATGGGAGGGGTGTTGGTGGGGAAAGTGGTGATGAGGCACTGGATGAGGATACTGGTGGAAACAAAGAGGTTCAGGTGAGAGTTCTTGTGAAGCGTGGAAACAAGCAGCAAACAAAGCAGATGTTCATCCCACGGAATTCCTCACTGGTGCAGAGTACAAAACAGAAAGAAGCAGCGGAGCTTCAAGAGAAAGAAGACATCAAGAGGCTTGTCTTGGAGTATAATGATAGAGAAGAGGAGGAGCTTAATGGATTAGGGACCCAGCCAACAAACTGGATGCAGAGTTTAGGTAACAAGGGTGGTGGCCGTGGCAGCACCTTGGAAGGAAACAGTGGCAGGGGTAGTGGATCAAGACATCGGCATCATAATTATTATGGCAGTGGAATCTATTATAGTAGAAGAAAGTGA 3567 0.4272 MDHHEDESNSKQDDEEAVARLEEMKKSIEAKMALRQSNLNPERPDSGFLRTLDSSIKRNTAVIKKLKQINEEQREALMDELRSVNLSKFVSEAVAAICDAKLRSSDIQAAVQICSLLHQRYKDFAPSLIQGLLKVFSPGKPGDESDTDRNLKAMKKRSSLKLLLELFFVGVIEDGGIFINIIKDLTSGEQLKDRDAAQTSLTLLSSFARQGRIFLGLSVGGPEIHEEFFKGLNITADQKKVFRKACYSFYDAAAELLQSEHSSLRLMEHENSKILNAKGELSDENVASYEKLRKSYDHLYRNISSLAEALDMQPPVMPEDGHTTRVTSGEEGISSASGKDTSVVEPVWDDEDTRTFYECLPDLRAFVPAVLLGEMEPKSSEQSAKNQDQTTEILPESDKGQQTTHESGEASTESNALPEAESTERVKDKEEKDKSKELDREKEKEKDNDKKGENEKDKLRSLEGTNLDALLQRLPGCVSRDLIDQLTVEFCYLNSKSNRKKLVRALFNVPRTSLELLPYYSRMVATLSTCMKDVSSILLQMLEEEFNFLINKKDQMNIETKIRNIRFIGELCKFKIAPPGLVFSCLKACLDDFTHHNIDVACNLLETCGRFLYRSPETTIRMANMLEILMRLKNVKNLDPRHSTLVENAYYLCKPPERSARVAKVRPPLHQYIRKLLFSDLDKSTIEHVLRQLRKLPWNECEPYLLKCFMKVYKGKYGHIHLIASLAAGLSRYHDEFAVAIVDEVLEEIRVGLELNDYGMQQRRIAYMRFLGELYNYEHVDSSVIFETLYLILIYGHGTSEQDVLDPPEDCFRIRLIITLLETCGHYFDRGSSKRKLDRFLIHFQRYILSKGALPLDIEFDLQDLFADLRPNMVRYTSIEEVNAALVELEEHDRIVSADRASSEKHSDTEKPSGRTTSTTKVVGNGQSNDNGTEENGVQDDNDSETDSGSDTIDVEGHDDEELDEENHDDGCETEDDDDDDDDGPGPASDEEDEVHVRQKVTEVDPLEEANFDQELKAVVQESMEQRRQELRGRPTLNMMIPMNVFEGSAKDHHGRGVGGESGDEALDEDTGGNKEVQVRVLVKRGNKQQTKQMFIPRNSSLVQSTKQKEAAELQEKEDIKRLVLEYNDREEEELNGLGTQPTNWMQSLGNKGGGRGSTLEGNSGRGSGSRHRHHNYYGSGIYYSRRK 1188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01896 1188 Pfam MIF4G domain 673 867 IPR003890 GO:0003723|GO:0005515
Pumo2g01896 1188 Pfam MIF4G domain 471 655 IPR003890 GO:0003723|GO:0005515
Pumo2g01896 1188 FunFam Regulator of nonsense transcripts UPF2 8 318 - -
Pumo2g01896 1188 Gene3D - 666 896 - -
Pumo2g01896 1188 PANTHER NONSENSE-MEDIATED MRNA DECAY PROTEIN 2 UP-FRAMESHIFT SUPPRESSOR 2 13 1136 IPR039762 GO:0000184
Pumo2g01896 1188 MobiDBLite consensus disorder prediction 1137 1166 - -
Pumo2g01896 1188 MobiDBLite consensus disorder prediction 376 459 - -
Pumo2g01896 1188 FunFam Regulator of nonsense transcripts UPF2 667 897 - -
Pumo2g01896 1188 MobiDBLite consensus disorder prediction 897 1010 - -
Pumo2g01896 1188 Gene3D - 8 318 - -
Pumo2g01896 1188 MobiDBLite consensus disorder prediction 1049 1075 - -
Pumo2g01896 1188 MobiDBLite consensus disorder prediction 990 1010 - -
Pumo2g01896 1188 FunFam Regulator of nonsense transcripts UPF2 426 664 - -
Pumo2g01896 1188 SUPERFAMILY ARM repeat 465 659 IPR016024 -
Pumo2g01896 1188 MobiDBLite consensus disorder prediction 313 341 - -
Pumo2g01896 1188 SUPERFAMILY ARM repeat 72 189 IPR016024 -
Pumo2g01896 1188 Coils Coil 539 559 - -
Pumo2g01896 1188 Gene3D - 425 663 - -
Pumo2g01896 1188 MobiDBLite consensus disorder prediction 897 912 - -
Pumo2g01896 1188 MobiDBLite consensus disorder prediction 327 341 - -
Pumo2g01896 1188 MobiDBLite consensus disorder prediction 420 459 - -
Pumo2g01896 1188 MobiDBLite consensus disorder prediction 1132 1188 - -
Pumo2g01896 1188 SMART if4_15 468 656 IPR003890 GO:0003723|GO:0005515
Pumo2g01896 1188 SMART if4_15 56 278 IPR003890 GO:0003723|GO:0005515
Pumo2g01896 1188 SMART if4_15 671 872 IPR003890 GO:0003723|GO:0005515
Pumo2g01896 1188 SUPERFAMILY ARM repeat 666 891 IPR016024 -
Pumo2g01896 1188 MobiDBLite consensus disorder prediction 379 419 - -
Pumo2g01896 1188 Pfam Up-frameshift suppressor 2 990 1126 IPR007193 -
Pumo2g01896 1188 MobiDBLite consensus disorder prediction 913 935 - -
Pumo2g01896 1188 Coils Coil 11 31 - -
Pumo2g01896 1188 MobiDBLite consensus disorder prediction 936 989 - -
Pumo2g01896 1188 Coils Coil 428 448 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01896 K14327 - gmx:100795746 2184.84