Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01891 ATGGCTTGCGTGAAATTGGGTTCCAAAGCTGATGCTTTCCAGCGTCAAGGGCAGGCCTGGTTCTGCACGACTGGGCTTCCTAGTGATATAGTTGTTGAAGTTGGAGAGATGTCCTTTCATCTTCACAAGTTCCCTTTGCTCTCTAGAAGTGGGGTTCTGGAAAGAATGATTGCTGAGGCTTCTGAGTCAGAGGAAGAATGTGTCATATCCCTTGGTGACATTCCTGGTGGGGCTAAAACATTTGAACTCGTGGCAAAATTCTGCTACGGTGTGAAACTTGAACTTACAGCATCAAATGTTGTGTACCTCTGGTGTGCTGCGGAGCGTCTTGAAATGACTGAGGAGTATGGTGAGGGTAATCTTATTTCACAGGCTGAAACCTTTTTCAATCAAGTGGTCCTCCGCAGTTGGAAAGACTCTCTGAGGGCACTTCAAACCTGTGATGATGTTTCGGACCATGCTGAAGAGCTCCACATTGTGAAAAGATGCATTGAATCACTCGCAGCAAAGGCGTCTACTGACCCAAATTTATTTGGGTGGCCAGTGCTGGAGCGTGGTGGTCCTTTGCAGAGCCCTGGTGGAAGTGTTTTGTGGAATGGAATAAGTACTGGGGCAAGACCAAAAAATTCGAGTTCAGATTGGTGGTATGAGGATGTAACGAATTTGAGTTTACCTCTTTATAAGAGATTGATAGCTGTCATGGAATCTCGAGGCATTAGGCAGGAGATTATTGCTGGTTCTCTTGCATTCTATGCTAAAACATATCTGCCTGGGTTAAATCGACGACAGGTTTCTGGTGAGTCCAGTACCCGTCTGACACAGGTAGCTATGGGGTCTCCGCTATCTGAAGATGACCAGAAGATTCTACTGGAAGATATTGATGAATTGCTCCCAGTGCAGAAGGGCCAGGTCCAAACAAAGTTCCTGTTTGGTCTACTAAGAACAGCCATGATTCTACGAGTGAGCCCCTCTTGCATATCAAATTTGGAGAGACGGATTGGCATGCAGCTTGAGCAAGCTACTTTGGAAGATCTCTTGATGCCGAATTTCTCATATTCAATGGAGACACTTTACAATGTTGACTGTGTGCAAAGAATTCTTGACCATTTCCTTGCCATGGATCAGGTTACTGGTGGTGCCTCTCCATGCTCAATTGATGATGGTCAATTGATTGGATCGCCTTCACTGACACCAATCACCATGGTAGCGAAGCTGATTGACGGTTACCTCGCAGAGGTTGCCCCAGATATTAATTTAAAACTTCCCAAGTTTCAAGCCCTTGCAGCTGCTGTTCCAGAGTATGCCAGGCCTTTGGATGATGGTTTATATCGTGCCATAGATATTTATTTGAAGTCTCATCCATGGCTGGTGGAGTCAGAGAGAGAGCAACTATGTAGGCTGATGGATTGCCAGAAGCTATCATTAGAAGCATGCACCCATGCTGCGCAGAACGAGAGGCTACCCATAAGAATAATTGTTCAAGTTCTATTTTTTGAGCAGCTCCAGCTTCGGACTTCAATCGCCGGTTGCTTTCTAGTTTCAGATAATCTCGATGGATCGAGGCAGTTGAGAAGTGGTTTTGTTGGATCGACCGAGGGTGGTGGCTGGGCGTCAGCTGTGAAGGAAAACCAGGTCTTGAAAGTGGGAATGGATAACATGAGGATGAGGGTGTCTGAGCTTGAGAAGGAGTGCTCAAACATGAGGCAGGAGATTGAGAAACTGGGCCGCGCGAAGGGATCGAGCGCTTGGGGAACCGTGTCCAAGAAACTCGGGTTCAAGTTGAAGTCTCAGATGTGTAGTGCTCAAGAAGGGTCAGTTAGCAACCAGAACAATGCAAATAGTAAGGTTGAGAAGTTGAAGGAAAGACATGTAAAGCACAAGAGAAGTTCTTCTATTAGTGACAAAGCATCAGTCTCTTCAATTGTTCATTCCTAG 1935 0.4599 MACVKLGSKADAFQRQGQAWFCTTGLPSDIVVEVGEMSFHLHKFPLLSRSGVLERMIAEASESEEECVISLGDIPGGAKTFELVAKFCYGVKLELTASNVVYLWCAAERLEMTEEYGEGNLISQAETFFNQVVLRSWKDSLRALQTCDDVSDHAEELHIVKRCIESLAAKASTDPNLFGWPVLERGGPLQSPGGSVLWNGISTGARPKNSSSDWWYEDVTNLSLPLYKRLIAVMESRGIRQEIIAGSLAFYAKTYLPGLNRRQVSGESSTRLTQVAMGSPLSEDDQKILLEDIDELLPVQKGQVQTKFLFGLLRTAMILRVSPSCISNLERRIGMQLEQATLEDLLMPNFSYSMETLYNVDCVQRILDHFLAMDQVTGGASPCSIDDGQLIGSPSLTPITMVAKLIDGYLAEVAPDINLKLPKFQALAAAVPEYARPLDDGLYRAIDIYLKSHPWLVESEREQLCRLMDCQKLSLEACTHAAQNERLPIRIIVQVLFFEQLQLRTSIAGCFLVSDNLDGSRQLRSGFVGSTEGGGWASAVKENQVLKVGMDNMRMRVSELEKECSNMRQEIEKLGRAKGSSAWGTVSKKLGFKLKSQMCSAQEGSVSNQNNANSKVEKLKERHVKHKRSSSISDKASVSSIVHS 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01891 644 MobiDBLite consensus disorder prediction 602 644 - -
Pumo2g01891 644 Pfam NPH3 family 213 478 IPR027356 -
Pumo2g01891 644 CDD BTB_POZ_NPY3-like 19 122 - -
Pumo2g01891 644 ProSiteProfiles BTB domain profile. 28 97 IPR000210 GO:0005515
Pumo2g01891 644 Coils Coil 543 577 - -
Pumo2g01891 644 Pfam BTB/POZ domain 27 113 IPR000210 GO:0005515
Pumo2g01891 644 SUPERFAMILY POZ domain 16 114 IPR011333 -
Pumo2g01891 644 ProSiteProfiles NPH3 domain profile. 213 502 IPR027356 -
Pumo2g01891 644 PANTHER OS12G0117600 PROTEIN 22 610 IPR043454 -
Pumo2g01891 644 Gene3D Potassium Channel Kv1.1; Chain A 11 131 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01891 Pumo-Chr2 36245507 36250350 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01891 8 632 EF-hand Containing Proteins AT3G44820 46.615 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01891 - - gmx:100794676 1222.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01891 2 36245507 36250350 Pumo2g01891 2 36245507 36250350 ECH