Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01886 ATGGAGGAGGAAGCAGAAGAAACGAAGAGCGCAGTGAGAGTATTCGTCGGAGGATTGGCGGAAACCGTGAGCGCCGAAGACCTTCGAAGCTTATTCGCCTCTCTGGGCACCGTCCAATCCGTCCAAACCATCCGAACCAAAGGTCGCAGCTTCGCCTACCTCGACTTCCTCTCCGACCATAAATCCCTTTCCAAGCTCTTCAGCAAGTATAATGGGTGTCTGTGGAAGGGTGGAAGGCTAAGGCTGGAGAAGGCTAAAGAGGACTATCTCGCGCGTTTGAAGAGAGAATGGGAACAAGGTGCTCTCGACGATGCTACTCAAAAACCACCCGCTGATGCTCCTGAGGAAATGCCCAACACTACACACGCTTCCAAGTCAAATACTAAACACCTCAATATTTTCTTTCCCAGATTGAGAAAGGTGAAATCCATACCTTTCAGTGGAACTGGCAAGCACAAATACAGTTTTCAGAATATTAAAGTTCCTCCACTCCCTGTGCATTTTTGTGATTGTGAGGAGCATTATACTCCTTTTGTCACTGAAAGAGAAAAACTATCTATTGATAGGGCAGCCGAAAGTGGTGGAATGAATGATGGAGAGATTAGCATAATGAATGCTGTGATGAACAAGCTATTTGAAAAGGAAAAGGTTTTGAATGCCAAAAACCTTGGAGAGGAGAAGGATTCTTTTGAATCACCTGATGCTTTACATTCTGATGAATGTGAAGATAGTGCAACAGATGATGATGATCTCATTATTAACATGGAGACGAAGAAAAAGAAAAATAAAACAGCTTTAATATGGACCCGGGAACTTGAAAGGATCTTGGAAAATCAGGAATCATGGTTGAATAAAACAAAAATTGCTAAGGAAGAACCCAACAAGAGCGTGCCTCCAGTGCAAAAAAGGAGTAATAGCAATCCTGACAAGAATAAGAAGAGAAAATCACTTCCCAAATTGGAAGCGTCTACTACCCCTGGAAGCAATACTAATATGCTGACACTTCCAGATGAGGAGGGATCTGGTGCACAGCCTACAGAACTAGAAGATGATTCCGGGGAATTGACTAAAGTTTCATGGTCTCAGAAGTCTTCATGGAAAGAACTTCTTGGTGACAAAGGCAATACTTCTTTCAGTGCTTCTCTCATATTGCCAAAGGTGGACTCTAGTAAGAATCAACGAAGATCTGACGATCTGTGCGCACCCGTATCTACAAACAACAAAACTGAAAACATGGAAAGGGATGGACACCTAGGGAGCAAACCTACCAATGCACAAGTGATAAAAGATGAACACCTAGGGAGCAAACCTACCAATTCAAGTGTGATAAAAGAGCTTGCCGAAGCTCAACCTACCAATAAACAAGTGATAGAAGATGTTACTGAAAATCAGCATAATGTGGCACCTAATAAGACGGGCAGAGGAGCTTCATGGCTGCAAAAACAATCATGGACACAAATGGTTAGTGAGAATAACAATTCATTTAGCATTTCACATATTTTGCCTGGCATTACATTCCCAGAGCCAATGGCCAAGGAGCCGATGGCCAAGGAGCCAATTATGGAACCTGCCATTTCCAATGATTGCAAGCATAATGGTGTAGCTAAGGATACTATTAACAAAGTTGTCAGTGATGGGTTTAATTCAAGGGAGACTATACCAGAAAAGAGTCAGCATATTGGTGCCAATGACATTGCTTCTGCTTCAGTAGTTGAGGAAAAAGTTGAAACAAGTCCAAGAGAACAATCCACTGAAGATGTTGAAATAGGGGAAACTTGCTTATTTATGAGAAGTGCTGCATCTTTGAAGGAATGGGCAAAAGCTAAGGCTGCTATGAGTGCATCACTCAAAAGAAAACGTGGTGAGAAGTAA 1872 0.4252 MEEEAEETKSAVRVFVGGLAETVSAEDLRSLFASLGTVQSVQTIRTKGRSFAYLDFLSDHKSLSKLFSKYNGCLWKGGRLRLEKAKEDYLARLKREWEQGALDDATQKPPADAPEEMPNTTHASKSNTKHLNIFFPRLRKVKSIPFSGTGKHKYSFQNIKVPPLPVHFCDCEEHYTPFVTEREKLSIDRAAESGGMNDGEISIMNAVMNKLFEKEKVLNAKNLGEEKDSFESPDALHSDECEDSATDDDDLIINMETKKKKNKTALIWTRELERILENQESWLNKTKIAKEEPNKSVPPVQKRSNSNPDKNKKRKSLPKLEASTTPGSNTNMLTLPDEEGSGAQPTELEDDSGELTKVSWSQKSSWKELLGDKGNTSFSASLILPKVDSSKNQRRSDDLCAPVSTNNKTENMERDGHLGSKPTNAQVIKDEHLGSKPTNSSVIKELAEAQPTNKQVIEDVTENQHNVAPNKTGRGASWLQKQSWTQMVSENNNSFSISHILPGITFPEPMAKEPMAKEPIMEPAISNDCKHNGVAKDTINKVVSDGFNSRETIPEKSQHIGANDIASASVVEEKVETSPREQSTEDVEIGETCLFMRSAASLKEWAKAKAAMSASLKRKRGEK 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01886 623 MobiDBLite consensus disorder prediction 223 247 - -
Pumo2g01886 623 Gene3D - 1 90 IPR012677 -
Pumo2g01886 623 MobiDBLite consensus disorder prediction 223 240 - -
Pumo2g01886 623 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 12 87 IPR000504 GO:0003723
Pumo2g01886 623 MobiDBLite consensus disorder prediction 287 359 - -
Pumo2g01886 623 SUPERFAMILY RNA-binding domain, RBD 3 99 IPR035979 GO:0003676
Pumo2g01886 623 CDD RRM_NOL8 13 86 IPR034138 -
Pumo2g01886 623 MobiDBLite consensus disorder prediction 101 126 - -
Pumo2g01886 623 MobiDBLite consensus disorder prediction 321 337 - -
Pumo2g01886 623 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 14 58 IPR000504 GO:0003723
Pumo2g01886 623 PANTHER TRANSCRIPTIONAL REGULATOR 5 622 - -
Pumo2g01886 623 MobiDBLite consensus disorder prediction 392 422 - -
Pumo2g01886 623 SMART rrm1_1 13 83 IPR000504 GO:0003723
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01886 - - gmx:100808161 995.342
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01886 2 36135279 36139269 Pumo2g01886 2 36135279 36139269 ECH