Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01847 ATGGGATTCAAGTATCTTCTGGTTGTTATGTGTGCTTGGGCTTGGTTTGGATCGTTGACTTTTGCAACTTCTGATGATGGGGGGTTGATGAGGATTGGTCTAAAAAGGAGGAATTTAGACCTTCAGAGTCTTAAAGCTGCAAGAATCAATGAGGCTGTTGTTCATCACAGGGATTTTGGGGGTGTTAATAAAAATTGTTGTGATGAAGATACAGTATATCTTAAAAATTATCTTGATGCACAATATTTTGGGGAGATTAGTATTGGTTCACCCCCACAATACTTCAATGTTGTGTTTGATACTGGCATCTCAAATCTTTGGGTCCCATCTTCCAAATGCATTTTCTCTATTGCTTGCTATTTTCATTCCAAGTATAGGTCGAAGATATCTAGCACCTATACCGAAATCGGAATACCTTGCAAAATCCCTTATGGCCAAGGATCTATTTTTGGATTTTTCAGCCAAGATAATGTACAAGTTGGGGATATCATCATCAAAGATCAACAATTTGCTGAGATTACAAGGGAAGGATCTTTGGCACTTGCAGCACTTCCATTTGATGGCATACTTGGACTCGGATTTCAGGATACTTCAGTTGGAAAAGTCACACCAGTGTGGTATAATATGTTAGAACAAGGGCTCATATGCCACAAAATATTCTCTCTTTGGCTAAATCAAGATCCAACAGAAGAGATGGGGGGTGAGATTGTCTTTGGTGGTATTGACTACAGGCATTTTAGAGGAGAACACACATACGTTCCACTTTCTCAAAAAGGTTATTGGCAGATTGATGTGGGAGATGTTCTACTTGCAAATAATTCAACAGGCTTATGTGAGGGTGGCTGTGCTGCAGTCGTGGACTCAGGGACATCTTTAATTGCTGGTCCAATTAGTGTTGTGACTCAAATTAACCATGCCATTGGAGCAGATGGATATGTCAGTTTTGAGTGTAAAAGCATTGTCCATAACTATGGCGATTCAATATGGGAATCCTTGATTGCTGGGTTAAATCCTGACATTATATGCAGTGACATTGGAGTCTGTTCAAATAATGGATTTTATACAACGGATGATGTTATTGAAACAGTGGTGCATAATCAAAGTTGGAATGGGTCACAAACAAGGGAGAGCCCCTTATGTAGTTTTTGCAATATGATTGTCCTTTGGATTCAAGTTCAGCTTAAGCAAAGCAATGTAAAGGAAAAAGTATTAAAACATGTGGATGAGCTGTGTGAGAAGCTCCCAAATCCCCCAGGACAATCATATATAAACTGCAATAGGATTGCTACTATGCCACACATTACATTCACCATTGGAAACAAGTCCTTTCCCCTCTCTCCAGAACAGTATATCCTTCGAGTTGAAGAAGGCTGTTCAACTGTCTGCTATGGCGGTTTTGTTGCTATAGATGTGCCTCCCCCACAGGGTCCCCTCTGGGTTCTTGGAAGTATTTTCTTGGGGGCATATCATACAGTGTTTGACTATGGCAATCTCCGTATAGGATTTGCAGAAGCTGCATAG 1521 0.403 MGFKYLLVVMCAWAWFGSLTFATSDDGGLMRIGLKRRNLDLQSLKAARINEAVVHHRDFGGVNKNCCDEDTVYLKNYLDAQYFGEISIGSPPQYFNVVFDTGISNLWVPSSKCIFSIACYFHSKYRSKISSTYTEIGIPCKIPYGQGSIFGFFSQDNVQVGDIIIKDQQFAEITREGSLALAALPFDGILGLGFQDTSVGKVTPVWYNMLEQGLICHKIFSLWLNQDPTEEMGGEIVFGGIDYRHFRGEHTYVPLSQKGYWQIDVGDVLLANNSTGLCEGGCAAVVDSGTSLIAGPISVVTQINHAIGADGYVSFECKSIVHNYGDSIWESLIAGLNPDIICSDIGVCSNNGFYTTDDVIETVVHNQSWNGSQTRESPLCSFCNMIVLWIQVQLKQSNVKEKVLKHVDELCEKLPNPPGQSYINCNRIATMPHITFTIGNKSFPLSPEQYILRVEEGCSTVCYGGFVAIDVPPPQGPLWVLGSIFLGAYHTVFDYGNLRIGFAEAA 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01847 506 Pfam Saposin-like type B, region 1 378 415 IPR007856 GO:0006629
Pumo2g01847 506 PANTHER BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED 18 504 IPR001461 GO:0004190|GO:0006508
Pumo2g01847 506 FunFam Lysosomal aspartic protease 68 310 - -
Pumo2g01847 506 PRINTS Pepsin (A1) aspartic protease family signature 234 247 IPR001461 GO:0004190|GO:0006508
Pumo2g01847 506 PRINTS Pepsin (A1) aspartic protease family signature 479 494 IPR001461 GO:0004190|GO:0006508
Pumo2g01847 506 PRINTS Pepsin (A1) aspartic protease family signature 284 295 IPR001461 GO:0004190|GO:0006508
Pumo2g01847 506 PRINTS Pepsin (A1) aspartic protease family signature 88 108 IPR001461 GO:0004190|GO:0006508
Pumo2g01847 506 ProSiteProfiles Saposin B type domain profile. 312 352 IPR008139 -
Pumo2g01847 506 ProSiteProfiles Peptidase family A1 domain profile. 82 503 IPR033121 -
Pumo2g01847 506 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 284 295 IPR001969 GO:0004190|GO:0006508
Pumo2g01847 506 Pfam Saposin-like type B, region 2 316 348 IPR008138 -
Pumo2g01847 506 SUPERFAMILY Acid proteases 29 505 IPR021109 -
Pumo2g01847 506 SUPERFAMILY Saposin 314 415 IPR011001 -
Pumo2g01847 506 Gene3D Acid Proteases 241 506 IPR021109 -
Pumo2g01847 506 ProSiteProfiles Saposin B type domain profile. 376 417 IPR008139 -
Pumo2g01847 506 Gene3D - 312 415 - -
Pumo2g01847 506 Pfam Eukaryotic aspartyl protease 81 505 IPR033121 -
Pumo2g01847 506 Gene3D Acid Proteases 30 240 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01847 Pumo-Chr2 34746746 34750976 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01847 K08245 - gmx:100782139 972.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01847 2 34746746 34750976 Pumo2g01847 2 34746746 34750976 ECH