Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01809 ATGAGAACGTCGTCGTTTGGGAGATGCGGCACCGGCGAGTTTGATTTGCCGGAAAATTTTGATACCTCGTCGCCGGTGACCGGAGGACACGCCTACGGCGCCATGTTGCCGGTGTTCCTCAACGACCTTCGCAGCAACCACCACAAGGAGCTTGTCGAGATCACGTTGGAGCTCGAAAACGACGCCGTTGTGCTCTGCAACGTGGCACCGGCGCCGTCTTCGGCTCCGAACGCTTCGCCGTCGTCTAGCGCTGCCGGCGGCGACGCTGCCTGCATCGTGGCGCGGAGTCTTTCGATTACGTCGAGGATTCGGAGGAAGTTTCCATGGCTGCGGTCGATGTCGTCGGCGTCGACGGAGAGTGCCGTCGCCGCCGCCGCCGCCGCCGTGGAGGATCCGGTGGTGACGGCGCGAAACGCGCGGAAAATGAGAGCGAAGCTTGAGCGGACGAGGTCGAGCGCGCAGAGAGCTTTGAAAGGTTTGAGATTCATCAGCAAGTCCGGCGAGGCCTCCGACGAGCTGTGGCGGAAGGTGGAAGAAAGGTTCAACTTGTTGGCCAAGGATGGCTTACTCGCACGAGAAGACTTTGGTGAATGCATAGGAATGGAGGACTCGAAGGAATTTGCCGTGTGTATATTCGACGCATTGGGTCGAAGGAAGGAAAGGAGAGTGAGCAGCATAAACAGAGAAGAGTTGCATGAGTTCTGGTTGCAAATCTCAGACCAGAGCTTTGATGCTCGGCTTCAGATTTTCTTTGACATGGCAGACAGTAATGAAGACGGAAGAATTACTAGGGAAGAAGTACAAGAGCTCATAATGCTCAGTGCTTCCGCAAACAAGCTATCGAAGCTAAAAGAACAAGCTGAAGGATACGCCACGTTAATAATGGAAGAATTAGATCCAGAGAACCTGGGTTATATCGAGCTGTGGCAGCTAGAAATGTTGTTACTAGAAAAGGATAGGTACATGAACTACAGCAGACAACTCAGCACCGCAAGTGTAAACTGGAGTCAAAACATGACCGATTTGAGGAACAGAAATGAGGTACAAAGATTCTGCAGGACACTCCAATGTCTTGCATTAGAGTATTGGAGAAGGGGCTGGATTTTCTTACTATGGTTGGTTACCACTGCTTGCCTATTTGGCTGGAAATTTTACCAGTATAGAAACAGATCAACTTTCCAAGTCATGAGCTACTGCATACCAGTGGCTAAGGGTGCTGCAGAGACACTGAAGCTCAACATGGCTCTCATCCTCTTACCAGTTTGTCGAAACACATTGACATGGCTTCGTTCTACAGGAGCCAGGAAGTTTGTCCCTTTTGATGACAACATTAATTTCCACAAGATTATTGCATTTGCCATAGCTGTTGGAATCGCCGTTCATGCAGGCAATCATCTGGCATGTGATTTCCCCCTTCTCATAAACTCATCTCCAGAAAAATTTTCACTTATAGCTTCAGATTTCAATAACAAAAGACCCACATACAAATCACTTCTGACCGGAGTTGAAGGCGTAACTGGAATCTCAATGGTTATTTTGATGGCTATCTCTTTCACTTTAGCCACTCACCACTTCCGGAGAAACGCTGTCAGGCTTCCTTCTCCCTTTAACAGATTGACAGGCTTCAATGCATTTTGGTACTCTCACCACCTCTTTGGTCTGGTCTATGTTCTGCTTCTCATCCATGGAACGTTCTTGTATTTAACCCATCGGTGGTACCAGAAAACGACATGGATGTATATCTCTGTTCCACTGTTGCTGTACATAGCAGAGCGTACTCTACGCACTCGTAGATCATCACATTATACAGTAAAAATTCTGAAGGTTTCGGGGCTACCAGGAAATGTATTCAGCTTACTCATGTCCAAGCCTAATGGATTCAAGTACAAAAGTGGACAATACATATTTTTACAATGCCCAAAAATCTCTCCCTTTGAATGGCACCCATTCTCCATTACCTCAGCCCCAGGAGATGAGTACCTAAGTGTTCATATTCGCATAGTGGGAGACTGGACCCAAGAACTTAAGCATCTTCTCACTAAAGAAGATGACAATTTACCTTCGGTTAATGGTCATGCAACGTTTGGTGAACTAATGCAACTGGATCAAAGAGGACAGCCGAGACTGCTTGTTGATGGCCCTTATGGAGCTCCAGCACAAGACTACCAGAATTTTGATGTACTCCTCCTCATAGGATTAGGAATTGGAGCAACTCCTTTCATTAGCATTCTCAGAGATCTTCTCAACAACACCAGAGCAATGGATGAACTAGTGGTGCAGGAGTCAAACACAGAAACAAGTCAAACAACCAGATCAGATGAGAGCTCCAACAGTTTTACATCTTCAAGTTTAACTCCAGGAGGAAATAAGAGGTCACGAAGGACCACAAATGCTTATTTCTACTGGGTCACTAGGGAACCTGGATCTTTTGAATGGTTTAAAGGAGTAATGGACGAAGTTGCAGAAATGGACCACAAAGGTCAAATTGAGCTTCACAACTATCTTACAAGTGTTTATGAAGAGGGGGATGCGAGATCAACCTTAATCACCATGATCCAAGCACTGAACCATGCCAAACATGGTGTTGACATCCTATCAGGCACTCGAGTAAGGACACATTTTGCTAGGCCTAATTGGAAAGAAGTTTTCACCAAGATTGCCTCTAAACATCCGTTTTCTACAGTAGGGGTGTTCTATTGTGGGATGCCAGTATTGGCGAAGGAGCTAAAGAAGCTATCACTTGAGCTGAGCCACAAGACAACTACACGCTTCGAGTTTCACAAGGAGTACTTTTGA 2796 0.4682 MRTSSFGRCGTGEFDLPENFDTSSPVTGGHAYGAMLPVFLNDLRSNHHKELVEITLELENDAVVLCNVAPAPSSAPNASPSSSAAGGDAACIVARSLSITSRIRRKFPWLRSMSSASTESAVAAAAAAVEDPVVTARNARKMRAKLERTRSSAQRALKGLRFISKSGEASDELWRKVEERFNLLAKDGLLAREDFGECIGMEDSKEFAVCIFDALGRRKERRVSSINREELHEFWLQISDQSFDARLQIFFDMADSNEDGRITREEVQELIMLSASANKLSKLKEQAEGYATLIMEELDPENLGYIELWQLEMLLLEKDRYMNYSRQLSTASVNWSQNMTDLRNRNEVQRFCRTLQCLALEYWRRGWIFLLWLVTTACLFGWKFYQYRNRSTFQVMSYCIPVAKGAAETLKLNMALILLPVCRNTLTWLRSTGARKFVPFDDNINFHKIIAFAIAVGIAVHAGNHLACDFPLLINSSPEKFSLIASDFNNKRPTYKSLLTGVEGVTGISMVILMAISFTLATHHFRRNAVRLPSPFNRLTGFNAFWYSHHLFGLVYVLLLIHGTFLYLTHRWYQKTTWMYISVPLLLYIAERTLRTRRSSHYTVKILKVSGLPGNVFSLLMSKPNGFKYKSGQYIFLQCPKISPFEWHPFSITSAPGDEYLSVHIRIVGDWTQELKHLLTKEDDNLPSVNGHATFGELMQLDQRGQPRLLVDGPYGAPAQDYQNFDVLLLIGLGIGATPFISILRDLLNNTRAMDELVVQESNTETSQTTRSDESSNSFTSSSLTPGGNKRSRRTTNAYFYWVTREPGSFEWFKGVMDEVAEMDHKGQIELHNYLTSVYEEGDARSTLITMIQALNHAKHGVDILSGTRVRTHFARPNWKEVFTKIASKHPFSTVGVFYCGMPVLAKELKKLSLELSHKTTTRFEFHKEYF 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01809 931 Gene3D - 716 931 IPR039261 -
Pumo2g01809 931 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 599 721 IPR017927 GO:0016491
Pumo2g01809 931 Pfam FAD-binding domain 603 718 IPR013112 GO:0016491
Pumo2g01809 931 CDD EFh 225 272 IPR002048 GO:0005509
Pumo2g01809 931 Gene3D Translation factors 588 687 - -
Pumo2g01809 931 PANTHER NADPH OXIDASE 207 931 - -
Pumo2g01809 931 FunFam Respiratory burst oxidase homolog A 146 263 - -
Pumo2g01809 931 ProSitePatterns EF-hand calcium-binding domain. 255 267 IPR018247 -
Pumo2g01809 931 Pfam Ferric reductase NAD binding domain 725 913 IPR013121 GO:0016491
Pumo2g01809 931 SFLD NADPH oxidase subgroup (NOX) 138 931 - -
Pumo2g01809 931 Coils Coil 136 156 - -
Pumo2g01809 931 MobiDBLite consensus disorder prediction 760 792 - -
Pumo2g01809 931 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 724 931 IPR039261 -
Pumo2g01809 931 FunFam Respiratory burst oxidase homolog A 590 682 - -
Pumo2g01809 931 FunFam Respiratory burst oxidase protein E 716 931 - -
Pumo2g01809 931 SUPERFAMILY EF-hand 162 327 IPR011992 -
Pumo2g01809 931 SUPERFAMILY Riboflavin synthase domain-like 602 718 IPR017938 -
Pumo2g01809 931 ProSiteProfiles EF-hand calcium-binding domain profile. 242 277 IPR002048 GO:0005509
Pumo2g01809 931 Gene3D - 146 263 - -
Pumo2g01809 931 PRINTS Cytochrome B-245 heavy chain signature 707 720 IPR000778 GO:0016020|GO:0016491
Pumo2g01809 931 PRINTS Cytochrome B-245 heavy chain signature 730 747 IPR000778 GO:0016020|GO:0016491
Pumo2g01809 931 PRINTS Cytochrome B-245 heavy chain signature 542 562 IPR000778 GO:0016020|GO:0016491
Pumo2g01809 931 PRINTS Cytochrome B-245 heavy chain signature 450 468 IPR000778 GO:0016020|GO:0016491
Pumo2g01809 931 Pfam Respiratory burst NADPH oxidase 145 245 IPR013623 GO:0004601|GO:0050664
Pumo2g01809 931 Pfam Ferric reductase like transmembrane component 405 560 IPR013130 -
Pumo2g01809 931 CDD NOX_Duox_like_FAD_NADP 606 883 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01809 Pumo-Chr2 33776717 33786342 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01809 23 931 Miscellaneous Gene Families AT1G19230 63.675 0.0 1177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01809 K13447 - gmx:100805697 1705.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01809 2 33776717 33786342 Pumo2g01809 2 33776717 33786342 ECH