Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01659 ATGGAGTGCGTTGCAGCGAGGAACTTGGCGGCAATGGCGTTTTGCGTGAGTCCTTCGTCGCGGTTGAGGTTGCGGCGGAAGAAGCTGTGGAGAAGACGAGCCGCGCCGTCGTGCGGCCACGGCGTGCGGTGGCTGAAGGTGGAGGCGAAGGCAGGGAGCGAGAGCTGCGTGGCGACCAAAGAGGACTTCGCCGATGAGGAAGATTACGTCAAGGCCGGTGGCTCCGATCTCGTTTTCGTCCAAATGCAACAGAACAAAGCCATGGAAATGCAATCCAAGCTCGCGGATAAGTTGCCGCCTATAGGAGATGATATACTGGATCTAGTTGTGATTGGTTGTGGTCCGGCTGGTCTTGCTCTGGCTGCTGAATCAGCCAAGTTAGGACTAAAAGTTGGGCTTATAGGTCCGGATCTCCCTTTTACAAATAATTATGGTGTGTGGGAGGATGAATTTAAAGATCTCGGACTTGAAGGTTGCATTGAGCATGTGTGGAAGGATACCATTGTCTATCTCGACAATAAGGACCCCATTTTTATTGGACGTTCCTATGGACGTGTCAGTCGACATCTGCTTCATGAGGAATTGTTAAGAAGGTGTGTCGAGTCAGGTGTCTCGTATCTTAGCTCAAGAGTAGAAAGTATTAGTGAGGCGAGCAATGGTCATAGTCATGTTGTCTGTGAATATGACGTTGTAGTGCCCAGCAGGCTTGTTACTGTTGCATCAGGAGCTGCTTCTGGGAAACTGTTGCAATATGAGGTCGGGGGTCCGAAGGTTTCTGTCCAAACAGCTTATGGTGTGGAAGTTGAGGTGGAAAACAATCCTTATGATCCAAATCTGATGGTTTTCATGGATTACAGAGACTACATGAAGCAAACTGTTCAATGTCCAGAAGCAAATTATCCAACATTTCTTTATGCAATGCCCATGTCCCGTACAAGAGTGTTCTTTGAGGAAACCTGTTTGGCATCAAAAGATGCCATGCCTTTTGATTTACTAAAGAAGAAGCTCTTTTCGAGATTAAACACAATGGGGATCAGAATTATGAAAACTTATGAAGAGGAATGGTCTTATATCCCAGTTGGCGGATCCTTACCAAACACAGAACAAAAGAACCTTGCATTTGGTGCAGCTGCCAGCATGGTGCATCCAGCCACAGGGTACTCCGTTGTGAGATCTTTGTCAGAAGCTCCGAAATATGCTTCAGTAATTGCTACTATTTTGAAAGATGGCCATGCCAAGGACATTATTACTCAAGAAAGAAGAAAGGAGAATCTATCTATGCAAGCTTGGAATACACTTTGGCCACAAGAAAGGAAACGGCAGAGAGCATTCTTTCTTTTTGGATTAGCTCTAATTCTGCATTTGGACATTGAGGGCATTCGAACATTCTTTCGTACTTTCTTCTGCTTACCTGATTGGATGTGGCAGGGATTTCTTGGCTCCTCTCTCTCATCTACAGATCTTGTATTATTTGCATTCTACATGTTCATAATAGCACCAAATAACTTGAGAATAGGTCTAGTCAGACATCTGCTTTCGGATCCTACTGGTGCAACTATGATAAAGACTTACTTAACGATATAG 1584 0.4533 MECVAARNLAAMAFCVSPSSRLRLRRKKLWRRRAAPSCGHGVRWLKVEAKAGSESCVATKEDFADEEDYVKAGGSDLVFVQMQQNKAMEMQSKLADKLPPIGDDILDLVVIGCGPAGLALAAESAKLGLKVGLIGPDLPFTNNYGVWEDEFKDLGLEGCIEHVWKDTIVYLDNKDPIFIGRSYGRVSRHLLHEELLRRCVESGVSYLSSRVESISEASNGHSHVVCEYDVVVPSRLVTVASGAASGKLLQYEVGGPKVSVQTAYGVEVEVENNPYDPNLMVFMDYRDYMKQTVQCPEANYPTFLYAMPMSRTRVFFEETCLASKDAMPFDLLKKKLFSRLNTMGIRIMKTYEEEWSYIPVGGSLPNTEQKNLAFGAAASMVHPATGYSVVRSLSEAPKYASVIATILKDGHAKDIITQERRKENLSMQAWNTLWPQERKRQRAFFLFGLALILHLDIEGIRTFFRTFFCLPDWMWQGFLGSSLSSTDLVLFAFYMFIIAPNNLRIGLVRHLLSDPTGATMIKTYLTI 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01659 527 SUPERFAMILY FAD/NAD(P)-binding domain 105 500 IPR036188 -
Pumo2g01659 527 FunFam lycopene epsilon cyclase, chloroplastic 103 446 - -
Pumo2g01659 527 Gene3D - 106 464 IPR036188 -
Pumo2g01659 527 PRINTS Pyridine nucleotide disulphide reductase class-I signature 107 129 - -
Pumo2g01659 527 PRINTS Pyridine nucleotide disulphide reductase class-I signature 237 246 - -
Pumo2g01659 527 PANTHER - 25 525 - -
Pumo2g01659 527 Pfam Lycopene cyclase protein 107 504 - -
Pumo2g01659 527 NCBIfam lycopene cyclase family protein 107 507 IPR010108 GO:0016117|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01659 Pumo-Chr2 31195759 31211256 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01659 K06444 - gmx:100788180 1002.66