Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01616 ATGTCGTCAATAGAATTTGTGATTGAGATTTTCAAGTCAAACTCTAATGTGGTCGCTTGTGTTATCTCTTTGCTTGTTGAAATTGAGGAAGGAATCGAACATCCTGTAATGGGGAGCCAGAAGGAGGTGAGCATTAATGAAGAAGGCGATGCAAACAAAAAGCAACAAATGCCTCGTGTTACTGTCATGATAAAGCTTATTCTCACTATGGTTTGGAGGAATCTCATAAGAAATCCTAATACCTGGGCAAGTGTTGTAGGCCTCGTTTGGTCTCTCATATTTTTTAGGTGGAACATCGGAATGCCAACTATTATAAAAGGTTCCATTGAAATAATGTCTAATACCGGACTCGGAATGGCCATGTTCAGTCTAGGTACTCTATAA 384 0.3932 MSSIEFVIEIFKSNSNVVACVISLLVEIEEGIEHPVMGSQKEVSINEEGDANKKQQMPRVTVMIKLILTMVWRNLIRNPNTWASVVGLVWSLIFFRWNIGMPTIIKGSIEIMSNTGLGMAMFSLGTL 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01616 127 Pfam Membrane transport protein 48 126 IPR004776 GO:0016020|GO:0055085
Pumo2g01616 127 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 45 126 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01616 Pumo-Chr2 30453545 30455092 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01616 26 125 Organic Solute Cotransporters AT5G57090 55.769 5.65e-34 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01616 K13947 - gmx:100788935 160.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01616 2 30453545 30455092 Pumo2g01616 2 30453545 30455092 ECH
Pumo4g00726 4 9391354 9392028 Pumo2g01616 2 30453545 30455092 PCT