Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01572 ATGGGATGTTCACATTCAAGGTTGGATGATGAAGAGGCAGTTCGGCTTTGTAAAGACAGAAAGAGGTTCATCAAGCAAGCTGTTGAACAAAGGACTCGATTTGCCACTGGACACATAGCATACGTAGAATCTCTGAAAAGGGTTTCAGCAGCACTTCGCGATTACATTGAAGGCGATGAGCCTCGTGAGTTCTCCTTAGACACAGTCATCACCCCACCTTTCACACCTGTGAAGAAGAAAACTGGCCCAGGATTCATTCCCATATCAGCAAAACCCTTTGCTACAACAGGAGCAATTGAGTTTGGGATTGGACCAAACTCTACTTTGAAAGTTAATTACTTTAGGCCTGGTGGTAACCCAGCAATTTCAGTTGAGGAAAGGCCTCAATCGCCGGAAAGGGTTCGGGTTGAGACATATTATTCTCCAATGCAGCAGTATGGCATTGATGGCTTTTTCAACATGCAATCCTCACCAGTGAATCCCTCAATTTTTGCTTACTCTCCCAATAATAGGCCTAATATCCCTCCCCCTTCACCTCAAGCTTCCCAATGGGATTTCTTTTGGAACCCATTTTCATCATTGGACAGTTATGGTTATCCTTCAAGAAGTAGCCTTGACCAGACTGCAATGGAAGATGAATACAGAGGACTTAGGCAGGTTAGAGAAGAAGAAGGAATACCAGACCTGGAAGAAGATGAAACTGAACATGAAGATTGTGTTGGAAAGAGAAATGTAGCAGAAGAAAGAACTAGACACAATGTAAATTCTTTCAAAGAAGAAGTTATTGTTGAAGATGTTGATGAAGAGGAGGAGGAGGAGGAAGAGGAAGAGGAAGAGGAGGATGAGGAAGAGGAGGAAGAAACAGACATTGAAGATGAAACTGAAACTGAGCATGATGCCAAAGATTCACAAGCTCATGGTAATGCAAGTTTTGAAGTATCAAAAGCTCAAGCTGCTGGTCATATTGAATCCAGACATAGGGAAATGACAATTGGTAAACAAGAAGCTGTGGAAGAAACACCAGGTTTTACTGTTTATGTAAACCGAAGACCAACAAGCATGGCAGAAGTGATCAATGATCTTGAAACTCAATTCACAATCGTCTGCAATGCAGCCAATGATGTTGCAGCATTGTTAGAGGCCAAGAAATCTCAGTATTTATTGACATCTAATGAACTTTCAGCATCAAAGTTGTTGAACCCAGTAGCTCTGCTCCGATCAGCTTCTTCACGCTCTTCTTCATCAAGATTTTTGATGAATTGTTCAAGCACTGGCAAGGAAGGATGTGAGGGAACTAAGGATCTCTCAGAGGGACATTGTATGTTATCCGGTAGTCACCACTCCACATTGGACAGATTAAATACATGGGAGAAGAAACTCTATGAGGAAGTCAGGTCTGGAGAACGTGTCCGAATTGCATATGAGAAGAAATGCAAGCAACTCAGGAACCTTGATGTAAAAGGAGAGGACCCCTCTTGTGCAGATAAAACAAGAGCAGCCATTAGAGAACTAGATACCCAGATAACGGTTTCAATACACTCAGTTGAAGCTATTTCAAGGAGAATCGAAACTCTAAGGGATGAAGAGTTGCATCCCCAACTTCTTGAATTGGTGCAAGGGCTGGAAAGGATGTGGAAAGTGATGGCAGAATGCCATCAGACACAGAAGAGAACCTTAGATGAAGCTAAGATTCTTCTAGCTGGCACTCCTTCTAAATCACGTGCCAGAAAACAGTCTTCCATGTCAATGACTGATCCAAACAGGCTGGCGCGTTCAGCCTCCAATCTTGAATTCGAGTTAAGGAACTGGAGAAACGCCTTTGAGTCATGGATCACTTCTCAGAGATCCTACATTCATGCACTAACTGGATGGCTTCTTCGGTGCATGAGATCCGAGCCTGACATATCAAAGTTACCATGCTCTCCTCGCAGGTCCAGTGGCACTCACCCTTTGTTTGGACTGTGTGTTCAGTGGTCAAGGCGCCTAGATGCCATACAAGAAAAGGCAGTGCTTGATGGCTTAGACTTCTTTGCAGCTGGAATGGGGTCCCTCTATGCACATCAGTTAAGAGAAGATTCTAGGAGAAACTCATTTGGATCAAAACAAAGCAATGGAAATATGGAAATGGTGGAAGTTGGTGAGGTGGAAGAGGTAATGGCTCCAGAGAAACTGGCTGAAGTTGCTATTAAGGTGCTTTGTGCTGGAATGTCTGTTGCTATTAGCTCACTGGCAGAGTTTGCATTGGATTCTGCTGAGGGGTACAATGAAGTTGTTAAGCAATGGGACAATGGGAAGTGTCAAAATACTACTTCTAGTGAGACTAGAACATAG 2331 0.4333 MGCSHSRLDDEEAVRLCKDRKRFIKQAVEQRTRFATGHIAYVESLKRVSAALRDYIEGDEPREFSLDTVITPPFTPVKKKTGPGFIPISAKPFATTGAIEFGIGPNSTLKVNYFRPGGNPAISVEERPQSPERVRVETYYSPMQQYGIDGFFNMQSSPVNPSIFAYSPNNRPNIPPPSPQASQWDFFWNPFSSLDSYGYPSRSSLDQTAMEDEYRGLRQVREEEGIPDLEEDETEHEDCVGKRNVAEERTRHNVNSFKEEVIVEDVDEEEEEEEEEEEEEDEEEEEETDIEDETETEHDAKDSQAHGNASFEVSKAQAAGHIESRHREMTIGKQEAVEETPGFTVYVNRRPTSMAEVINDLETQFTIVCNAANDVAALLEAKKSQYLLTSNELSASKLLNPVALLRSASSRSSSSRFLMNCSSTGKEGCEGTKDLSEGHCMLSGSHHSTLDRLNTWEKKLYEEVRSGERVRIAYEKKCKQLRNLDVKGEDPSCADKTRAAIRELDTQITVSIHSVEAISRRIETLRDEELHPQLLELVQGLERMWKVMAECHQTQKRTLDEAKILLAGTPSKSRARKQSSMSMTDPNRLARSASNLEFELRNWRNAFESWITSQRSYIHALTGWLLRCMRSEPDISKLPCSPRRSSGTHPLFGLCVQWSRRLDAIQEKAVLDGLDFFAAGMGSLYAHQLREDSRRNSFGSKQSNGNMEMVEVGEVEEVMAPEKLAEVAIKVLCAGMSVAISSLAEFALDSAEGYNEVVKQWDNGKCQNTTSSETRT 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01572 776 Pfam Protein of unknown function (DUF630) 1 59 IPR006868 -
Pumo2g01572 776 MobiDBLite consensus disorder prediction 236 261 - -
Pumo2g01572 776 PANTHER UNCHARACTERIZED 1 760 - -
Pumo2g01572 776 Coils Coil 259 296 - -
Pumo2g01572 776 MobiDBLite consensus disorder prediction 262 296 - -
Pumo2g01572 776 MobiDBLite consensus disorder prediction 223 319 - -
Pumo2g01572 776 Pfam Protein of unknown function (DUF632) 354 681 IPR006867 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01572 Pumo-Chr2 29444580 29449657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01572 1 232 Acyl Lipid Metabolism Gene Families AT2G27090 27.311 1.31e-14 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01572 - - gmx:100780704 1360.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01572 2 29444580 29449657 Pumo2g01572 2 29444580 29449657 ECH
Pumo4g00759 4 9968510 9974783 Pumo2g01572 2 29444580 29449657 PCT