Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01433 ATGCGTTCTCGATCTCGTTATGGATTCGGGATTTCCCAAATTACCTTCGGAGCAGTGGTGGTGGTGTTTTTATTTTTTGCACGCGCGGCGTCGGGTCTGAACCTCACCGCCCTCCTCTCCACCGTGCCGGAGCTCTCCCAATTCACGTCCCTCCTCTCCTCCGCCACGCCCCTCGCCGCGGATCTCTCGGACCGCTCCTCCCTCTCCCTCCTCGCCGTCCCCAACGCCTACCTCGCCGCCGACGACCACCTCTCCCGCCACCACCTCTCCCCCGCCGCCCTCGCCGACGTCCTCCGCTACCACGTCCTCCTCCAGTTCCTCTCCTGGTCCGACCTCCGCGCCCTCCCCGCCTCCGGCAAGCTCGTCACCACGCTCCTCCAGACCACCGGCCGCGCCACCGACAACTTCGGCTCCGTCAACCTCACCCGCGACCCCCTCTCCGGCGTCGTCTCGATCCGCTCCCCCGCCCCCTACTCCCCCTCCAACGCCACCATCATCTCCCTCGTCAAAACCCTACCCTACAACGTCACCATCTTCGCCGTCAATTCCCTCCTCATCCCCTACGGCCTCGACCTCATGGCCTCCGAAACCCGCCCCAACATCGTCCTCAACATCACCAAAGCCCTCATCGACGGCCACAGCTTCAACGTCGCCGCCTCCATGCTCGCCGCCTCCGGAGTCGTCCAGGAATTTGAGGCGGACGAAGGCGGTGCTGGAATCACGCTTTTCGTTCCCGTCGATGACGCCTTCGCCGATCTCCCTCCCTCCGTTGCGCTTCAGTCTCTTCCCGCGGATAAGAAAGGGGTTGTTCTCAAATTTCACGTGCTCCATTCGTATTACCCTCTCGGTTCTCTTGAATCCGTTGTTAACCCTTTTCAACCTACCCTCGCTACTGAGGCCATGGGTGCCGGAAGCTTCACGCTCAACATTTCGCGCGTGAACGGCTCCGTCGCCATCAACACCGGCATCGTTCAGGCCTCAATTACGCAGACCGTTTTCGATCAAAATCCCGTCGCAATTTTCGGAGTTTCCAAGGTTCTCTTGCCGAGGGAGATTTTCGGGAGAAATCCAATTGTGTCCACTAAGCCTCTTGATAACGCTCCTCCACCGGACGATGATGCACTCTCGCCGGAGAATTCACCAGGATTTGATGGCCAGCCCTCGCACCTATCATCGCCACCAGGGTTTCGCGAAGATGTGAGGTCTCATGCTGGTGGTTCTGGTGGTTCCTTGAACTTTGTTCTTCTTCTTTGCTGTATAGGATTGTATTTTGTGGTATAG 1281 0.5933 MRSRSRYGFGISQITFGAVVVVFLFFARAASGLNLTALLSTVPELSQFTSLLSSATPLAADLSDRSSLSLLAVPNAYLAADDHLSRHHLSPAALADVLRYHVLLQFLSWSDLRALPASGKLVTTLLQTTGRATDNFGSVNLTRDPLSGVVSIRSPAPYSPSNATIISLVKTLPYNVTIFAVNSLLIPYGLDLMASETRPNIVLNITKALIDGHSFNVAASMLAASGVVQEFEADEGGAGITLFVPVDDAFADLPPSVALQSLPADKKGVVLKFHVLHSYYPLGSLESVVNPFQPTLATEAMGAGSFTLNISRVNGSVAINTGIVQASITQTVFDQNPVAIFGVSKVLLPREIFGRNPIVSTKPLDNAPPPDDDALSPENSPGFDGQPSHLSSPPGFREDVRSHAGGSGGSLNFVLLLCCIGLYFVV 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01433 426 SMART fasc_3 241 350 IPR000782 -
Pumo2g01433 426 SUPERFAMILY FAS1 domain 33 188 IPR036378 -
Pumo2g01433 426 ProSiteProfiles FAS1/BIgH3 domain profile. 32 185 IPR000782 -
Pumo2g01433 426 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 22 407 IPR033254 -
Pumo2g01433 426 ProSiteProfiles FAS1/BIgH3 domain profile. 202 347 IPR000782 -
Pumo2g01433 426 SUPERFAMILY FAS1 domain 209 349 IPR036378 -
Pumo2g01433 426 FunFam Fasciclin-like arabinogalactan protein 4 203 350 - -
Pumo2g01433 426 Pfam Fasciclin domain 214 349 IPR000782 -
Pumo2g01433 426 Gene3D FAS1 domain 203 350 IPR036378 -
Pumo2g01433 426 MobiDBLite consensus disorder prediction 359 402 - -
Pumo2g01433 426 FunFam fasciclin-like arabinogalactan protein 4 32 187 - -
Pumo2g01433 426 Gene3D FAS1 domain 27 187 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01433 Pumo-Chr2 21234561 21236759 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01433 - - gmx:100788356 765.763