Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01423 ATGTGCTCTCTTGCAAATTCTATTTTCAGTTGCTTAAACATTCTTCTTAGTTCTATTTTCACAAGCCCACAAAGTTCTCTTCTAGTCTGTGTTCTGTTTTTCTTAGACTGCAACCAACAGACTTCTCTATTTATGCTTGAGGAGCAAGTTGCTGAGGTTGAAAAGTTCTACCGTACCATTAATGCTCAAGTTAATAATGCCAAAGACAAAGGCCGGGAGAAGCATGTTATTGGAACTATAAGGTCACAGCAAGGTGGATCAAGTAGGGAAGCTAATTCTTCAAGCACAATGAGAGAGGTTATGCACCAGTTTTCCACAATATTGCATCAGATAACTCAGCATAGATGGGCTTGGCCATTCATGGATCCTGTAGATGTTGAAGGTCTTGGGCTACATGACTACTATGAGATTATTGAAAAGCCTATGGATTTCAGTACGATAAAAAGGAAAATGGATCCTAAGGATGGTTCTGGTTATAAGAACGTGCGTGAGATATATTCTGATGTCAGGTTGGTTTTTAAGAATGCAATGAAATACAACGATGAAAAACATGACATCCACATTATGGCAAAGACATTGCTGGAAAAATTTGAGAAGAAATGGCTGCAGCTATTGCCTAGAGTTGCTCAGGCGGAAACTGAAAAATTAAAGGAAGAAGCACATGTGCAGTTGGAAGCGCAGCTTGCTCAAGAAGCTGCTTATGCCAAAATGGCAAAGGATATAAGCACTTCGCTGTGCGATGTTGAAGTGCACTTAAAGAATCTCAAAGAAATGGTGATGGAAAAGTGCAGGAAACTATCATATCATGAGAAATTGGAACTTGTGAAGTATTTCAACAGTCTGAATGTTGACAATCTCCTCAAGGCAATGGAGATAATTCATGAGAATGACCCAACCTTCCAACCTAATGCTCAAGAGGTCTGCCTTGACCTTGATCGTCAGAGCGACTACACACTGTGGAAACTAAACGCTTTTGCCAAAAAAGCAGTGGAAGATCAGGACAGAGCTATTGCTGAGGAGTTAGCTACTGAGGACCAGAGAGAACACCAACAAATGGAGGAAACTGTGATTCTTTTGCCAAAGAGATCCGTGTGA 1095 0.4055 MCSLANSIFSCLNILLSSIFTSPQSSLLVCVLFFLDCNQQTSLFMLEEQVAEVEKFYRTINAQVNNAKDKGREKHVIGTIRSQQGGSSREANSSSTMREVMHQFSTILHQITQHRWAWPFMDPVDVEGLGLHDYYEIIEKPMDFSTIKRKMDPKDGSGYKNVREIYSDVRLVFKNAMKYNDEKHDIHIMAKTLLEKFEKKWLQLLPRVAQAETEKLKEEAHVQLEAQLAQEAAYAKMAKDISTSLCDVEVHLKNLKEMVMEKCRKLSYHEKLELVKYFNSLNVDNLLKAMEIIHENDPTFQPNAQEVCLDLDRQSDYTLWKLNAFAKKAVEDQDRAIAEELATEDQREHQQMEETVILLPKRSV 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01423 364 SUPERFAMILY Bromodomain 89 208 IPR036427 GO:0005515
Pumo2g01423 364 PRINTS Bromodomain signature 115 128 IPR001487 GO:0005515
Pumo2g01423 364 PRINTS Bromodomain signature 131 147 IPR001487 GO:0005515
Pumo2g01423 364 PRINTS Bromodomain signature 168 187 IPR001487 GO:0005515
Pumo2g01423 364 ProSiteProfiles Bromodomain profile. 112 187 IPR001487 GO:0005515
Pumo2g01423 364 Pfam Bromodomain 105 191 IPR001487 GO:0005515
Pumo2g01423 364 Gene3D - 260 336 IPR038336 -
Pumo2g01423 364 PANTHER OSJNBA0053K19.4 PROTEIN 54 329 - -
Pumo2g01423 364 Pfam Bromodomain extra-terminal - transcription regulation 265 327 IPR027353 -
Pumo2g01423 364 Coils Coil 335 355 - -
Pumo2g01423 364 SMART bromo_6 93 206 IPR001487 GO:0005515
Pumo2g01423 364 ProSiteProfiles NET domain profile. 256 337 IPR027353 -
Pumo2g01423 364 Gene3D - 55 226 IPR036427 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01423 Pumo-Chr2 21113882 21118906 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01423 - - gmx:100795037 449.514