Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01399 ATGGATGCAAAACCTCCTCAACTTGCTTCACAACCTTTGAACTATCAGACATGGTTCTTGAAAGTTTCCATCCACTGTGAAGGTTGCCGGAGGAAAGTAAAGAAAGTTCTGAAGAGCATTGACGGTGTTTTCACTGCAACAATAGACCCACAGGAGCACAAAGTAACAGTCACTGGAAGTGTTGGTGTTGAGACCCTTCTCAGGAAACTGGTCAGAGCCGGAAAACATGCCGAGATATGGCCGGAGAATCTCGACAGCGACGGAAAAATCTCCAGCAACAAAGGGGAGAAGAAGAAAAACAAGAAGAATGAAGCAAGAGAACCACAGAGCTTGGAAAACAAGGGAACTGAAAATGCTACTACTACTGCCAAGTGTAACAACAGTGAGAACAAGAGCAGCAACAACTCGCCGGAAAAGTCCCCCTCCGGTGATCAGATTCCGGCGGAGGGTGGTGGTGGTTCTGGTAAGAAGAAGAAAAAGAAAGTTCAGAGTGGTGGTGGCAGTAGTTTGAATTCAGCAGCAGCAGCAGCATCTACTGGTGCAGCTGCACACAGTGGATTGCAGTTTGAGGATCTTGTGGGCCAGGTGAATGTGAGCCCTCCACGTCAGCAACAATCGTTTTCGTACCCAGAAACTGGTTATCCTCCGATGGTTTATGTTGCAGCAGCTTATAACAGATTTTATCCTTCTTATTACTATGTTCCATCTTCACCCTACATGGACGGCTATCACTTTCAATCACCACCCTTGGTTTCCTTTGAGATCTTCAGTGATGAAAATGCTAATGGCTGCTCTGTTATGTGA 804 0.4614 MDAKPPQLASQPLNYQTWFLKVSIHCEGCRRKVKKVLKSIDGVFTATIDPQEHKVTVTGSVGVETLLRKLVRAGKHAEIWPENLDSDGKISSNKGEKKKNKKNEAREPQSLENKGTENATTTAKCNNSENKSSNNSPEKSPSGDQIPAEGGGGSGKKKKKKVQSGGGSSLNSAAAAASTGAAAHSGLQFEDLVGQVNVSPPRQQQSFSYPETGYPPMVYVAAAYNRFYPSYYYVPSSPYMDGYHFQSPPLVSFEIFSDENANGCSVM 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01399 267 SUPERFAMILY HMA, heavy metal-associated domain 14 81 IPR036163 GO:0046872
Pumo2g01399 267 CDD HMA 20 78 IPR006121 GO:0046872
Pumo2g01399 267 Pfam Heavy-metal-associated domain 22 73 IPR006121 GO:0046872
Pumo2g01399 267 MobiDBLite consensus disorder prediction 83 172 - -
Pumo2g01399 267 ProSiteProfiles Heavy-metal-associated domain profile. 15 78 IPR006121 GO:0046872
Pumo2g01399 267 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 33-RELATED 10 267 - -
Pumo2g01399 267 Gene3D - 14 79 - -
Pumo2g01399 267 MobiDBLite consensus disorder prediction 83 111 - -
Pumo2g01399 267 MobiDBLite consensus disorder prediction 112 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01399 Pumo-Chr2 20779164 20780810 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01399 - - gmx:102666396 345.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01399 2 20779164 20780810 Pumo2g01399 2 20779164 20780810 ECH
Pumo4g00356 4 4933936 4935672 Pumo2g01399 2 20779164 20780810 PCT