Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01396 ATGGCTTCTCAAACCTTGCATGACACAAAGAAATCCCAAGCTAGGCGAGCGTTACGTTCCCTAGCAACAGGCATTGCAGTGCCCTTCACCCTCACATTGACCATAATCATCCTCTTTGGTTCAGGACGCAATTACAACCACATATCCAAGCCCTTTTGGTTTGCACCACTCTGGTTCATTCACTTGGCCACATTGGGCTCATCTTTCTTCATGGGTCTTGCAGCGTGGCTAGTGTGGGCTGATGGTGGGTTTCAAGGGGAAACCGATGCAATGTCTCTCTACATAGCTCATGTCTCTCTAAGCATTGTGTGGCACCCCATTGTCCTCATTATGGGTGCTTATTGGCTTGCTTTGATTTCTTGCCTTGTGGATTTTGGGACCTTATTTCTGTGTTACTTGAGGTTTAGAAAGGTGAACCCTTTTGCTAAAGATCTAGCCAAACCATGTCTGGCATGGGTTGCATATCTTTGTCTTGTTAGCTTTAAGCTAATGTTTATTTGA 501 0.4531 MASQTLHDTKKSQARRALRSLATGIAVPFTLTLTIIILFGSGRNYNHISKPFWFAPLWFIHLATLGSSFFMGLAAWLVWADGGFQGETDAMSLYIAHVSLSIVWHPIVLIMGAYWLALISCLVDFGTLFLCYLRFRKVNPFAKDLAKPCLAWVAYLCLVSFKLMFI 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01396 166 Gene3D TspO/MBR protein 16 165 IPR038330 -
Pumo2g01396 166 FunFam translocator protein 2 17 166 - -
Pumo2g01396 166 Pfam TspO/MBR family 40 164 IPR004307 GO:0016020
Pumo2g01396 166 CDD TSPO_MBR 21 155 IPR004307 GO:0016020
Pumo2g01396 166 PIRSF PBR 10 166 IPR004307 GO:0016020
Pumo2g01396 166 PANTHER PERIPHERAL-TYPE BENZODIAZEPINE RECEPTOR 17 164 IPR004307 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01396 Pumo-Chr2 20749369 20749869 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01396 K05770 - gmx:100790873 318.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01396 2 20749369 20749869 Pumo2g01396 2 20749369 20749869 ECH