Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01379 ATGTTAGACCTCAAATACATATGGGTACTTGTTTCAATCAACAGGTTCATTCAAGACACCTTGGAAGATGAGAAAACCAGGAATGGTCTAAAATTGAGATGCACCTCCAAGTTGAGGATTCAAAAGCAGGAATTCTTTGAATTCTCTGAGCAGTCAGTGTTGTCCAATCTCTACTGGGGCATTGACAGCATTGAAGCTGCCATTGAAGCTCAACAGCCAGAAGAAAGATCCTTCAGGCTAAGGAATTCAGAACAAATGCTTCAGGTGCCAGCAATGCTTGATGAGGAAGAGGTCACAGCCACAATTCCAAACCGTTACTTGGTGTGCTGCTCCTACTTTTACCTCTCAGTGGTTAGGAAGCTCCAGGGAGATGAGTGGCAGGCAGCACTGCATTTTCTCCAAGCAGTGTTGGTCTCACCAAAGCTTGTTTGGACAGAATTTGCATCACAACTTTGTGAAAGTCTTTTCCCACAATCAAGCATCACCATGATGCAGGGAAACAGTAGCAGTAGAAGTTTGGAGTCTGTGTCTTCTGAGGATGAAATGGATGAAGCAATTAGGGAGGTGGCAAGGAGGTACAAGGAGTGTCTTGTGTATTACCAGGTCATGCTTTATGGAGAGACTCCATGGTGGCGCAGTTATTGCAGCAAACAATCACCACGTTCTGTGGAATGTACCAGATACTGGCTGTGTATCTTCAGCTTCAATTCAACACGAACCAGGATTGAAAAGTTGCAATATGGTCACAAGAAAGCCCTCAAACAACTGAAGTCAGTTCAGTATCACGGCAAAGAGGACCAAACAATTTCAAGCATCAAATGCTTCACAGATATGATGATAGAAGCACACTCTAAAACACCGGTATCAGTGGATGCATGCTATAAGGATTTTAGAGACAGAAAGGACCTGGAAAATGTGGATGACAGAAAATTTTATATACAAACCACAATAACAAAAGCAGATGATCTACCACCAGAAATCTACAACTGGAAGCTACAACAACATTCTGGTTTGCCTCAAGCTCATCAATATCCAATGCAAGAACAGTTGGACAAAAGAAACATAATTAAGCTTGATTCTAGCAGATTCAACAGGTCCATAGAAGATGTTGCTTTATCTATCTCAAAATACAGAGATAAAACAGGAAATACTCTCTTAAATTGTCATGTAGAGGATGAATTAAATGAGGACGCATCGCAGCCAAAAAAATTGTTTGATCATGTAACATTTACATCTGCTTGCAAACATAGGCCAAGCCAGAAAAATCATGAAGAAAGTTCTGAGATACAAAGATTATATAGCCTAGGAAAGTTTGATGAAGTGTATTCAAACTCCAGAAGATATTCCCTGCGCGACTTGTCAGAACTGACTGAAAGGAGAATTTCAGAACTACATTATTCAGAGGTATTAGGAAAATGTGATGAAGAATATACTGTAGACATTGCATCAATTTATGAGAGCTTGATTAGTTCATCGGGCGCCACTTATGCTTCTTTAAAAGATGTGATTTTGGATGAGCTGCTAATAGCTATCTCTACTTCCAAAGAGGAAAGAAAAATAAGGGCATCAGTATCTATTTTGACAACAATAATTTCAAGGAACAAGTCAATCATAGAAGATGTCAAGAAGAAAGGTTTAAGGTTGTGTGATCTAGCAAGTGCTCTAAAACAAAATGTCCATGAGGCAGCAATTCTAATCTATTTAATAAATCCTTCACCTATAGATATAAAAACGTTGGAACTGCTGCCAATATTAGTGGAGATTGTATGCACTTCAAATAGTTACAAGAATAAGCCAGAGTCACTTCTTTTGACACCTCATGCGGCATCATTGATGATCATTGAAGAACTAGTAACTTCATTTGACTATGCCACAAATAACATGCATTTGGCCACCATCAGTTCTCCTCACGTTCTCAGCGGATTTCTAGAAGTTGCCAGAAATGATAATCTAGAAGAATTTTTCTCTTTGACCACCATTCTTATAAAATGCATGCAGTATGATGCACAGTGCAGAAAGTATGTGTCACAATTCACTCCACTTGCTCCCTTTATCCACCTTTTGCAGTCAGAAAACACCCGCGCCAAATGCACGGCTCTTGAATTTTTTCATGAAATCCTTTGCATACCACGATCATCAGCTATTAGTTTGCTGCAGCGTATACAGCAAGAAAGAAGCATCAATATTATGCAGATACTAATGCATTGTGCACATCAATTACAACCAGATCACCAGCTTTTAGCAGCAAATATTTTGCTTCAGTTAGACATACTGAACTCCCCTGATAAAGGCGTGTTCAGAGAAGAAGCAGTGCAGATCCTTCTCAGGGCAATGACATCTGAAGAAAGCTCAGAGCAGATATTATCTGCATCCATTCTATCAAATCTTGCCGGTACATATGCTTGGACAGGAGAACCATATACAGCTGCATGGTTGGTGAGAAAGACAGGCTTGACCTCTCCCTATCACCAGAATATGATAAGAAACTTCAACTGGTTGGATCCGAGTCTACAGGATACCAGCACAGATTTGTGGTGCAGTAAAATTGCCAAATGTATCATAAGCCTTGGGGATCCTGTCTTTTATACTTTAGAGAGGGTGCTAAGAAGCAAGATAAAGAGGGTTTCTAGAGACTGCCTTATAGCCATTTCATGGCTTGGTTGTCAAATATCCAAAAGCCCAGACAGCATCAGTTATTCTGCATCTGAGATTATACTAAGTGGAATTGAGCAGTTTCTGCATCCTGGGATGGAGTTGGAGGAAAGACTTCTAGCATGTATGTGCATGTTTAATTATGCCTCCGGGAAAGGAAAGCAAAAACTAATGCATTTCTCAGAAGGAGTAAAGGAATCACTAAGACGCCTTTCAAATGTAATTTGGATGGCGGAGGAATTACACAGAGTAGCCGATTACTTGCTGCCAAACATATCACGTATTTCTTGCGTTCACACACAAATCCTCGAGGCAGGTTGTGGCTTGAGCTTAGCAGTTTGCTCCCTCGTATACTTCAAGGGATTGCTGTTCAGTGGATATTCAGATGGATCAATCAAGGTCTGGGATATTAGGGGGCACTCAGCCAGTCTTGTATGGGACATCAAAGAGCACAAGAAGTCTGTGACATGCTTTTCACTTTATGAGCCATCAGACAGCCTTTTAAGTGGATCCACTGATAAAACCATAAGGGTGTGGAAAATGATCCAGAGAAAGCTGGAATGTGTTGAAGTTATAGCATTGAAGGAACCAATTCATCATTTGCGTGCACATGGTGAAACAATTTTTGCAATCACTGAAAGCCAGGGATTAAAGGTAGTTAATGAATCAAGAGCGATCAGAGATATTTTGAAAGGTAAGCATGTAAAGTGCATGACAGTGGCTCAAGGAAAGTTATATATTGGATGCACAGATTCAAGCATACAGGAGTATTCCACAACACACAACCGTGAACTAGAAATCAAACCCCCTACAAGGAGTTGGAGGAAGCAAAGTAAGCCCATAAATGCAGTTGTAGCATATAGAGACTGGCTCTATAGTGCAAATAAGCATGTTGAAGGCACAACGTTCAAGGAATGGAAAAGAAGTAGGAAGCCAAAAGTTTCAATTCTTACGGACAAAGGAGATAATGTGGCGGCCATGGAAGTGGTAGAAGACTTCTTGTACCTAATCTCCAGCTCTTCACCAAACAACATTCAGATATGGTTGAGGGGGGCACCAAAAAAGTTGGGGAGAATATCAGCAGGAAGCAAGATAACAAGCATCCTCGCAGCCAATGACATCATTTTATGTGGTACTGAGACTGGACTAATCAAGGGCTGGATCCCTCTGTAG 3825 0.4071 MLDLKYIWVLVSINRFIQDTLEDEKTRNGLKLRCTSKLRIQKQEFFEFSEQSVLSNLYWGIDSIEAAIEAQQPEERSFRLRNSEQMLQVPAMLDEEEVTATIPNRYLVCCSYFYLSVVRKLQGDEWQAALHFLQAVLVSPKLVWTEFASQLCESLFPQSSITMMQGNSSSRSLESVSSEDEMDEAIREVARRYKECLVYYQVMLYGETPWWRSYCSKQSPRSVECTRYWLCIFSFNSTRTRIEKLQYGHKKALKQLKSVQYHGKEDQTISSIKCFTDMMIEAHSKTPVSVDACYKDFRDRKDLENVDDRKFYIQTTITKADDLPPEIYNWKLQQHSGLPQAHQYPMQEQLDKRNIIKLDSSRFNRSIEDVALSISKYRDKTGNTLLNCHVEDELNEDASQPKKLFDHVTFTSACKHRPSQKNHEESSEIQRLYSLGKFDEVYSNSRRYSLRDLSELTERRISELHYSEVLGKCDEEYTVDIASIYESLISSSGATYASLKDVILDELLIAISTSKEERKIRASVSILTTIISRNKSIIEDVKKKGLRLCDLASALKQNVHEAAILIYLINPSPIDIKTLELLPILVEIVCTSNSYKNKPESLLLTPHAASLMIIEELVTSFDYATNNMHLATISSPHVLSGFLEVARNDNLEEFFSLTTILIKCMQYDAQCRKYVSQFTPLAPFIHLLQSENTRAKCTALEFFHEILCIPRSSAISLLQRIQQERSINIMQILMHCAHQLQPDHQLLAANILLQLDILNSPDKGVFREEAVQILLRAMTSEESSEQILSASILSNLAGTYAWTGEPYTAAWLVRKTGLTSPYHQNMIRNFNWLDPSLQDTSTDLWCSKIAKCIISLGDPVFYTLERVLRSKIKRVSRDCLIAISWLGCQISKSPDSISYSASEIILSGIEQFLHPGMELEERLLACMCMFNYASGKGKQKLMHFSEGVKESLRRLSNVIWMAEELHRVADYLLPNISRISCVHTQILEAGCGLSLAVCSLVYFKGLLFSGYSDGSIKVWDIRGHSASLVWDIKEHKKSVTCFSLYEPSDSLLSGSTDKTIRVWKMIQRKLECVEVIALKEPIHHLRAHGETIFAITESQGLKVVNESRAIRDILKGKHVKCMTVAQGKLYIGCTDSSIQEYSTTHNRELEIKPPTRSWRKQSKPINAVVAYRDWLYSANKHVEGTTFKEWKRSRKPKVSILTDKGDNVAAMEVVEDFLYLISSSSPNNIQIWLRGAPKKLGRISAGSKITSILAANDIILCGTETGLIKGWIPL 1274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01379 1274 ProSiteProfiles Trp-Asp (WD) repeats profile. 1032 1065 IPR001680 GO:0005515
Pumo2g01379 1274 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1032 1065 - -
Pumo2g01379 1274 Gene3D - 503 974 IPR011989 -
Pumo2g01379 1274 ProSiteProfiles Trp-Asp (WD) repeats profile. 1006 1029 IPR001680 GO:0005515
Pumo2g01379 1274 SMART WD40_4 1194 1233 IPR001680 GO:0005515
Pumo2g01379 1274 SMART WD40_4 980 1020 IPR001680 GO:0005515
Pumo2g01379 1274 SMART WD40_4 1025 1064 IPR001680 GO:0005515
Pumo2g01379 1274 Gene3D - 975 1273 IPR015943 GO:0005515
Pumo2g01379 1274 SUPERFAMILY ARM repeat 566 966 IPR016024 -
Pumo2g01379 1274 SUPERFAMILY WD40 repeat-like 1003 1270 IPR036322 GO:0005515
Pumo2g01379 1274 Pfam WD domain, G-beta repeat 1030 1064 IPR001680 GO:0005515
Pumo2g01379 1274 PANTHER OS04G0584500 PROTEIN 2 973 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01379 - - gmx:100782870 2371.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01379 2 20545963 20554841 Pumo2g01379 2 20545963 20554841 ECH