Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01365 ATGGTGGTCCTAGCACGCACACTCATTGTCATTTCACTCTCTGCTCTCTCTTTCTTCTCAGATTCATGTTCTGAGTATCCATCATCTTCAGATAGATCACAACTTCCCCTATTCGCATTTAGTTGGTGGGATGACAAGGGCACATTCCAGGCCGGTGACACAGCAACCATCAAAGTCAAAGTGCTTGAGAATGCTGATAAGATTGACAGAAAGGCTTTCAACCCCGTACTAACCGTTAATGGAAAGGAAGGGAACAGTTCCTACGTGTCTACAGTGTTGTCAAATTTCCAAGGAGACCCGAATGAATGGAAAATTTCCTTCAGCCCCATCAGGGTTGGATTGTTTAATGTACTCATCACTGAGGACGGTTATAAAGTTGATGATTCATCTTTGCATTTCCAAGTTGAGCCAGGGAACATGTACCCGTCTGTGTGCGTTGCATCGTGGAAGGGCGTGAGACATGAATATGAAGCTGGTTCAAAAGCTACAATTATGGTACTCCTTAAAGATGCATTTGGGAACAGTATCTCTAAGACGACTGAAGTGTCCTATTTGCCTGATTTTAAGTTGTCTGTGCTGCATGAAAATGGTTCTGTTGCAAGTGTTCCAGATATCTCTAACATAGGGTGGAATGAGTTTGATTATATAGTCATTGAGTTTGTCGTGACGAAAGCTGGAAAGTTCTCCTTGAGCTTAGAAGGAGGAAACCAAACCTTGAATGGTTCTCCATTGCCATTGAAGGTGAATCCAGGACCTATAGATGTCACTAACTGTATTGCCAAATGGAACATTGAATCACATGCATGGCAATTGGCTTCCAAGATGGAAATCTTTATACATCAGTTAGATCAATATGGAAATCTGGTTTCTGGACTGTATCCTTTTGATTCTGAAGTTGTTGAAAGAGATACAAACTTGTCAATACCGATATCAGATCTTCACTTTGAGGAAGTGGATGCTGGAATTCATTTGTTTTCGTTTAGCAATTTGGAGCCAGGGAACTTCCTGTTGACAATATATGATTCCAAGCATAATAAAAGCATTTCCAATATGCCATATGTTTACACTGTTTTTATAGGTTATTGTGATGGGGTTAAAAGTGTTGTTAATGGATCTGGTTTAAATGATTCAGTAGCTGGTGTAAAGTCAGAATTCTCTGTTTATTTGAATGACATCTATCAATATCCTTCCCCTGTTGAAGCAAACATACTTCAAGTACAAATTTCAAGAGAAAATGACTCCTACAGCGCTTTGCCAATCATATATCCCATTCTAAACAATAATGAGAGTACAATAGCTTCAGGAGTGAGATATGATGGAATTAGGCACATGGAAATCGCCCCATCACCTTCAATAGAGCTTGGTAACAATCCTAATGGGAGCGGGAGCTTTGTCATGGCCAGTGCTTTTCATGTGAATTACATACCAGAAAAAAGTGGCTTTTATGATATTAATGTATATTGTGGGAACATATTATTGAACGAGGGACATTCATTCAGGAAAGAGGTAAAAGCAGGTGAAGTAAATGTTTCCTTGTCAAGAGTTGTGAGGTTTTCTTCTAAGGTGCCAAAGCTGTCGAAAAATGATATAGTTGTGCAGCTTGTGGATTCATATTTAAACCCTGTCCTCTCACAACAATCGAAGTTGAAATTGGAGATTGCTTCTACTAATAATTCTGGCTTTTCAACTTTGGACATTACGGATAATAAGGATGGATCATACAGCTGCAGATATATGGCCAAAGATGTTGGCACTTATGAGATTTGTGCTTCCTTTGATGGCAAGCGTTTCTTGTCATGTCCCTTCAGTATCAATGTGTACAGCAGTGAATATTTTCCTAAAGCTAACAATGATACAATATCTATTTGGGAGGATCAATCCATTGCCTTTGATGCCTTAGCAAATGATTATTTTGCGGGTGATAATGCAAGTATAGTTGAATTCTCGAAATCAGATCATGGTTCACTTATACAGAATGGAAGGATCTTTCGTTACACTCCTTATAAAGGGTATTATGGAAACGATTCTTTTTGGTATACAATTTCTGATATAAATGGAAATCTTGCTACTGCTTCCGTGTACATATCTGTTCTCAATGTTCCACCTCAGTTTGTTTCTGTTCCAAATCAACTGCTAGCAACAGAAGATTTGATAAGCCCTAGATTTGGTGGTTTCACCGGGTTTGAGTTAACTTATTCAAATCCAAAGGAGAATATTTCTGTCAATCTTAGTGCACAATCTGGAAGTATACTTCTGTCTCCTATGGCAATGCAATTTGGGCAAGTAATGTGGAGTGAACTTACAATTAATTCAGGAAGTGAAACAACAACCAGTTTAATAATAGAAGGCTCTGTGGAAGTAATTAATTTTGCGCTTCAGTCAATTCAGTATCTGGGAAATGAAAACTTTTATGGTGGAGATACCATTCAAGTTTCTGCCAGGAATAAAAATGGGGTGAATTCATTGGGTGTTCCAATATTTGTTGATCCTATCAATGACCCTCCATTTATTAGAGCCCCCTACTTCATCATATTGAGGAGTAATGAAGATGAGACCCTTATCTTTGACCAAGAGAAAGACAAGTTTGACTTTTTCATTGGAGATCCCGATCTTCTTACCTTCCCTGGTGATCAGGCTCATTTTTTTGTGACGTTCTCTATGGAAGTAAATGATGGATTGTTAGTGACAAATCTACCAGTTCATTTGATCAATACAACTGAATTGAAGCACAGATATAATTATCAGTGGCAGCCTCTTCAGACATATGTTACTATCTCAGAGCACTTTATGGTCAAAGCTCATGGAATCAGATTTCAGGGAACAGTCAATGACTGCAATAGTGTTATGCAGCAACTGTTCTATCATGGAGGTGAGCATGGAGCTGTTTTAACATTGACATTAAATGACATGGGAAACTATGGATGTTTTCCAGATTGTGCAGACGGAATGTCAATGCCATTATATACCGAAGCTGTGGTTAATTTAATGAGAAAACAACCAATGAGTTCATTTCTTGCTCACACCTTAGGATCAATCATTGTCATTGAATTTGTTATCATGTCCTCACTTGGAGTGTTGCTTCTGTACTTCACCTGTAAATGTGCAATTCTTCTTGCACATGAAAGAAGAAACCGTGAGAAAAGGTCTTCAGAGCTATCTACTACACAAAGTTCCCACAGAGAAACTTCAAGCGTAAACATATCTGACAATGCTACCTATGTCACTGGTTGCTGTTCAAGTCCTTCCTTGCGTCGTTTTGGTATGCAATCCTCCAACTTTCGCCAACGTGCTTCAATAACTTCAAAGTTGGAACTTTCAGGTGCCGCCGACTATTTCAAGTTGGAGGATCTAGCAAAGCAGGAAACCAATGCTCTCCAACAAGTGAAATCCAGCATACAGTTGTGCCTACCTCTACACTTTTAA 3423 0.3891 MVVLARTLIVISLSALSFFSDSCSEYPSSSDRSQLPLFAFSWWDDKGTFQAGDTATIKVKVLENADKIDRKAFNPVLTVNGKEGNSSYVSTVLSNFQGDPNEWKISFSPIRVGLFNVLITEDGYKVDDSSLHFQVEPGNMYPSVCVASWKGVRHEYEAGSKATIMVLLKDAFGNSISKTTEVSYLPDFKLSVLHENGSVASVPDISNIGWNEFDYIVIEFVVTKAGKFSLSLEGGNQTLNGSPLPLKVNPGPIDVTNCIAKWNIESHAWQLASKMEIFIHQLDQYGNLVSGLYPFDSEVVERDTNLSIPISDLHFEEVDAGIHLFSFSNLEPGNFLLTIYDSKHNKSISNMPYVYTVFIGYCDGVKSVVNGSGLNDSVAGVKSEFSVYLNDIYQYPSPVEANILQVQISRENDSYSALPIIYPILNNNESTIASGVRYDGIRHMEIAPSPSIELGNNPNGSGSFVMASAFHVNYIPEKSGFYDINVYCGNILLNEGHSFRKEVKAGEVNVSLSRVVRFSSKVPKLSKNDIVVQLVDSYLNPVLSQQSKLKLEIASTNNSGFSTLDITDNKDGSYSCRYMAKDVGTYEICASFDGKRFLSCPFSINVYSSEYFPKANNDTISIWEDQSIAFDALANDYFAGDNASIVEFSKSDHGSLIQNGRIFRYTPYKGYYGNDSFWYTISDINGNLATASVYISVLNVPPQFVSVPNQLLATEDLISPRFGGFTGFELTYSNPKENISVNLSAQSGSILLSPMAMQFGQVMWSELTINSGSETTTSLIIEGSVEVINFALQSIQYLGNENFYGGDTIQVSARNKNGVNSLGVPIFVDPINDPPFIRAPYFIILRSNEDETLIFDQEKDKFDFFIGDPDLLTFPGDQAHFFVTFSMEVNDGLLVTNLPVHLINTTELKHRYNYQWQPLQTYVTISEHFMVKAHGIRFQGTVNDCNSVMQQLFYHGGEHGAVLTLTLNDMGNYGCFPDCADGMSMPLYTEAVVNLMRKQPMSSFLAHTLGSIIVIEFVIMSSLGVLLLYFTCKCAILLAHERRNREKRSSELSTTQSSHRETSSVNISDNATYVTGCCSSPSLRRFGMQSSNFRQRASITSKLELSGAADYFKLEDLAKQETNALQQVKSSIQLCLPLHF 1140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01365 1140 SUPERFAMILY E set domains 362 492 IPR014756 -
Pumo2g01365 1140 ProSiteProfiles Filamin/ABP280 repeat profile. 359 503 IPR017868 -
Pumo2g01365 1140 Gene3D Immunoglobulins 353 511 IPR013783 -
Pumo2g01365 1140 PANTHER JITTERBUG, ISOFORM N 766 1072 IPR044801 GO:0030036|GO:0051015
Pumo2g01365 1140 ProSiteProfiles Filamin/ABP280 repeat profile. 510 606 IPR017868 -
Pumo2g01365 1140 SUPERFAMILY E set domains 528 609 IPR014756 -
Pumo2g01365 1140 SMART flmn_3 504 609 IPR001298 GO:0005515
Pumo2g01365 1140 Gene3D - 613 694 - -
Pumo2g01365 1140 SUPERFAMILY E set domains 141 255 IPR014756 -
Pumo2g01365 1140 Gene3D Immunoglobulins 525 612 IPR013783 -
Pumo2g01365 1140 Pfam Bacterial Ig domain 603 686 - -
Pumo2g01365 1140 Gene3D Immunoglobulins 139 249 IPR013783 -
Pumo2g01365 1140 Pfam Filamin/ABP280 repeat 361 490 IPR017868 -
Pumo2g01365 1140 Pfam Filamin/ABP280 repeat 527 602 IPR017868 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01365 Pumo-Chr2 20386150 20395998 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01365 - - gmx:100786794 1877.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01365 2 20386150 20395998 Pumo2g01365 2 20386150 20395998 ECH