Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01344 ATGGCGGCGGGGACAATGGCGACGGCGGCCGGCGCAGCGGTGATGCTCTACTACGTGCTGAGCCGGCGGTTGGCGCGGAAGGCGGAGGACGACGGCGAGGATCACGGCGGCAGCGACGTGTCGAAATCGAGCAGATCGGTTCGCCGGAGAAGGATTTCCCGGCGGCCGGCGCAGGCTCCGGCGACGCTGCTGGAGTCGATCGTGACGCTGTCGGAGACTTTAAGGTTCACTTATTCCGAGACACTTGGAAAATGGCCCATCGGCGATTTGGCCTTCGGCATCAACTACTTCATGCGCAAGCAGGGTAATTTGGCAGTTGCTAGTGTGTATGCTGGGAATGATTGTGTGCAGCTCAAAGGGGATGAGATTATTGTGGAGCTGTATGAGCTGTTGAGGCTTTTGACTTTGTGTATGCTTTTCTCCAAGAAGCCATTTCCTGTGTTTTTAGATTCTGCTGGGTTTTCCCTTGATGATGTGCTCATTCAGAAGCCAAAAGCTGGGCTTCTGAAGCCTGCATTCACAATTATACGTGATACACAATCAAAATGTTTACTTCTATTGATCCGGGGTACTCATAGCATAAAAGACACGCTGACAGCTGCAACTGGTGCTGTTGTCCCCTTCCACCATTCAGTTTTAAATGATGGTGGGATAAGCAACTTGGTTTTAGGATATGCACATTGTGGTATGGTTGCTGCAGCTCGTTGGATTGCAAAGCTCTGTACTCCTACCCTACTTAAGGCACTTGGTGAATGTCCAGACTTCAAAGTCAAGATTGTTGGGCACTCACTTGGTGGTGGTACTGCTGCACTGTTAACATATATTCTCAGAGAGCAGAAAGAGTTCTCTTCAAGTGCATGTGTTACATTTGCCCCAGCTGCCTGCATGACGTGGGAGTTAGCAGAATCTGGAAAACACTTTATCACTACCATCATAAATGGTTCTGACTTGGTGCCAACATTTTCCACTTCATCTATTGATGATCTCCGTTCTGAGGTCACTGCATCCTCTTGGTTAAATGATCTACGGGATCAGGTTGAACATACAAAGGTCCTGAATGTTGTCTACCGCTCTGCAACTGCACTTGGATCTCGCTTACCATCTATATCTAGCGCAAAAGCTAGGGTAGCTGGTGCTGGTGCTATTCTGTGGCCAGTAACCAGTGGCACTCAGGTTGTGATGAAGCGTGCACAAAGTGTTGCTGAAGCTGTTGTCAGAACTCGATCATCATTGTCATCATGGTCTTGCATGAGTGCACGTCGCCGAAATGTGGGTCCATCGTCAAACTCTAAAACTGAGGACTTAACCGAAGCCTCTCTAATATCTGAGAGAAGCACAGAAATTCTTGTGACTGGAGAGGTAGTAAGAGAACCTATGCTTAAAGATGAAAATACTTCCTCAAGTGGAGGATCTGGCCATGATGACACAGATGAAGAGGAACAGCTCATTCCTGCTAATCAAGACATTACTGCATCTGCTGTTGGCGACTTCACAGAAGGCCAGTTATGGTATGAACTGGAGAAGGAGCTTCAAAAACAGGAAAATACTATCAACATTCATGCTCAAGAAGAAGAGGCTGCAGCAGCAAAAGAGATCACAGAAGAAGAAAATCAACTTGTTGATGCTGCTGCTGCAGAATGCAGTAGCAGTTCAATCACAACATCAGACAACTTGGACAGCCATCAATTTTATCCGCCTGGCAGGATCATGCATATTGTCTCTGTACCTTCATCGGATGAGTCAAATTCAAATTCTGATGACCCTTTAGAAGAACATGTCGGCTTATATGAAACACCTAGAGAGCTGTACAGCAAGCTCAGACTTTCAAGAACCATGATCAATGATCATTACATGCCAATGTATAAGAAGATGATGGAACTATTAATCCGAGAACTAGAGAAAGATAGCAGCTGTAATATTTTGGATTAA 1929 0.465 MAAGTMATAAGAAVMLYYVLSRRLARKAEDDGEDHGGSDVSKSSRSVRRRRISRRPAQAPATLLESIVTLSETLRFTYSETLGKWPIGDLAFGINYFMRKQGNLAVASVYAGNDCVQLKGDEIIVELYELLRLLTLCMLFSKKPFPVFLDSAGFSLDDVLIQKPKAGLLKPAFTIIRDTQSKCLLLLIRGTHSIKDTLTAATGAVVPFHHSVLNDGGISNLVLGYAHCGMVAAARWIAKLCTPTLLKALGECPDFKVKIVGHSLGGGTAALLTYILREQKEFSSSACVTFAPAACMTWELAESGKHFITTIINGSDLVPTFSTSSIDDLRSEVTASSWLNDLRDQVEHTKVLNVVYRSATALGSRLPSISSAKARVAGAGAILWPVTSGTQVVMKRAQSVAEAVVRTRSSLSSWSCMSARRRNVGPSSNSKTEDLTEASLISERSTEILVTGEVVREPMLKDENTSSSGGSGHDDTDEEEQLIPANQDITASAVGDFTEGQLWYELEKELQKQENTINIHAQEEEAAAAKEITEEENQLVDAAAAECSSSSITTSDNLDSHQFYPPGRIMHIVSVPSSDESNSNSDDPLEEHVGLYETPRELYSKLRLSRTMINDHYMPMYKKMMELLIRELEKDSSCNILD 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01344 642 PANTHER LIPASE CLASS 3 PROTEIN-LIKE 6 636 - -
Pumo2g01344 642 MobiDBLite consensus disorder prediction 29 54 - -
Pumo2g01344 642 MobiDBLite consensus disorder prediction 456 478 - -
Pumo2g01344 642 SUPERFAMILY alpha/beta-Hydrolases 157 324 IPR029058 -
Pumo2g01344 642 Coils Coil 518 538 - -
Pumo2g01344 642 CDD Lipase_3 177 328 - -
Pumo2g01344 642 Gene3D alpha/beta hydrolase 157 358 IPR029058 -
Pumo2g01344 642 MobiDBLite consensus disorder prediction 29 46 - -
Pumo2g01344 642 Pfam Lipase (class 3) 186 322 IPR002921 GO:0006629
Pumo2g01344 642 Pfam Lipase 3 N-terminal region 51 123 IPR005592 GO:0016042
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01344 Pumo-Chr2 19602513 19607862 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01344 1 636 Acyl Lipid Metabolism Gene Families AT4G16070 67.068 0.0 766
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01344 - - gmx:100782138 1121.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01344 2 19602513 19607862 Pumo2g01344 2 19602513 19607862 ECH