Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g01315 ATGAGTCCAACATGGGTTTTTGTGCTGAGTATTGTAGCAATGTTGGTGGTAGTGAATGCACAATCATCAGTGAAGCCATTGGTGAAGATAGTGAAGGGGAAGAAGGTGTGTGACAAAGGGTGGGAGTGCAAGGGTTGGTCTGCTTATTGCTGCAATGAGACTATCTCTGACTACTTCCAGACATATCAGTTTGAGAACCTCTTTGCAAAGCGCAATTCGCCAGTGGCACATGCTGTTGGTTTCTGGGACTACCGTTCTTTCATCACTGCTGCAGCACTCTATCAGCCTCTTGGCTTTGGCACCACAGGAGGAAATACCAGTGGCCAGAAGGAGGTTGCAGCTTTCCTTGGCCATGTGGGAAGCAAGACCACTTGTGGTTATGGGGTGGCTACTGGGGGACCCTTAGCCTGGGGCTTATGCTACAATAAGGAATTGAGTCCTGATAAATACTACTGTGATGACTACTACAAATTGACCTACCCTTGCACTCCTGGCGCAGCATACTATGGCCGTGGCGCCATCCCACTTTACTGGAACTACAATTATGGAAAAGCTGGGGAAGCCTTGAAGGTGGATCTGTTGAACCATCCAGAATACATTGAACAAAATGCCACCCTAGCCTTCCAGGCTGCAATCTGGCAGTGGATGACCCCACCAGAGAAGCACCTACCTTCACCGCATGATGTCTTTGTTGGCAACTGGAAACCCACCAAGAATGACACATTGTCCAAAAGGGTACCTGGATTTGGTGCCACCATAAATTTGTTGTATGGGGATCAAACTTGTGGCCAGGGACCTGATAATGAGGCCATGAACAACATCATTTCCCACTATCTTTATTACCTTGATCTCATGGGTGTTGGCAGAGAAGAGGCAGGGCCTAATGAAGTTCTCTCCTGTGCTGAGCAAGCTCCTTTTAAGCCCTCTGGCCCACCATCTTCTGCCACAAATTGA 954 0.4832 MSPTWVFVLSIVAMLVVVNAQSSVKPLVKIVKGKKVCDKGWECKGWSAYCCNETISDYFQTYQFENLFAKRNSPVAHAVGFWDYRSFITAAALYQPLGFGTTGGNTSGQKEVAAFLGHVGSKTTCGYGVATGGPLAWGLCYNKELSPDKYYCDDYYKLTYPCTPGAAYYGRGAIPLYWNYNYGKAGEALKVDLLNHPEYIEQNATLAFQAAIWQWMTPPEKHLPSPHDVFVGNWKPTKNDTLSKRVPGFGATINLLYGDQTCGQGPDNEAMNNIISHYLYYLDLMGVGREEAGPNEVLSCAEQAPFKPSGPPSSATN 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g01315 317 Gene3D - 63 306 - -
Pumo2g01315 317 PIRSF Endochitinase 1 307 IPR016283 GO:0004568|GO:0005975
Pumo2g01315 317 Gene3D Endochitinase, domain 2 143 202 - -
Pumo2g01315 317 SUPERFAMILY Lysozyme-like 55 306 IPR023346 -
Pumo2g01315 317 FunFam Endochitinase (Chitinase) 143 202 - -
Pumo2g01315 317 PANTHER CHITINASE-RELATED 9 304 - -
Pumo2g01315 317 Pfam Chitinase class I 63 290 IPR000726 GO:0004568|GO:0006032|GO:0016998
Pumo2g01315 317 CDD chitinase_GH19 63 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g01315 Pumo-Chr2 19252553 19254313 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g01315 20 306 Glycoside Hydrolase AT3G16920 82.230 0.0 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g01315 - - gmx:100809617 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g01315 2 19252553 19254313 Pumo2g01315 2 19252553 19254313 ECH