Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00995 ATGGGGAAAAAGCGTGTAATGACGCCAGCCAAGGACGTTGACTTATCCACCATCAAGTATGAGCGTGAAGTTGTGCAAGCTCCGCATTTGACTGGATTTGTATTTAGATTATTTGTGAGGATACTTGAAGCTCCGCTGATAGGTTCTATCATTATGAATATTTTGAAGAAGGAAAATAAAATTGATGAGTTATTGCGGCACACTGTGATACCTGAGGAACCCATGTTTAAACCTGAATATCCACCTCAAGAAATGGAGCCTGGTGTTGTTGTCCTTGAGGAAGATGGGAGACCTGAAGATCGAGTTGAGTCTGCCTTGAAGTGTCTTCCGCATTATAATGTTGCTGAATTATGGGAAAATTCATCTGCATCCTTTCGGTACTGGAAAATACGTGACTATGCTCATGCTTATCGATCTAGAAAAGTAACCCCATCTATGGTTGCTGAGCGCATCATCTCAATTATAGAGGAGAATGGAAGAAATAAACCTCCTACACCACTATTGATATCCTTTGATGCTGCAGAAGTCCGGGCGCAGGCGGCAGCATCTACTCAGAGGTTTGAAGCAGGAAATCCATTATCGATGTTGGATGGAATTTTCATGGCCATCAAAGATGACATAGATTGTTATCCTCATCCATCTAAGGGTGCATCTACATGGATGCATGAGGTACGCACTGTAAAGAAGGATGCAGTCTGTGTTTCAAAACTGCGTAGCTGTGGTGTCATATTCATAGGGAAGGCAAATATGCATGAGTTAGGCATGGGTACAACAGGAAATAATCCTAATTATGGAACTACAAGAAATCCTCATGCACCTGATAGGTATACTGGTGGATCTTCTTCAGGTCCAGCTGCAATTGTTGCTTCTGGACTATGTTCTGCTGCATTGGGAACTGATGGTGGAGGTTCAATCCGTATTCCTTCTTCCCTTTGTGGTGTGGTGGGATTGAAGACAACTTATGGGCGGACAAGCATGGAGGGGTCATTATGTGATTCTGGGACTGTGGAAATTATTGGACCCATTGCTTCAACGGTGGAGGATGTCATGCTAGTGTATGCAGCAATGTTGGGTGCATCACCTGCAAATAGAATCAGTTTGAAACCGTCACCACCTTGTTTGCCAATTCTTTCATCCAACGATGATTTAAATGCCTTGGGATCTTTAAGAATAGGAAAGTACACCCCGTGGTTTAATGATGTGCATTCAACTGAAATCTCTGATAAATGTGAGGATGCACTTGATCTGCTGTCAAAGGCGCATGGTTGTGAAATGATAGAAATTGTTATACCAGAGCTTCTTGAGATGCGAACTGCCCATGTTGTTTCCATTGGCTCTGAATGCTTATGTTCACTGAATCCTGATTGTGAAGACGGGAAAGGTGTAAAATTGACATATGATACTCGTACAAGTTTGGCACTATTTCGGTCATTTACAGCAGCGGATTATATTGCAGCCCAATGTATTAGACGAAGGAATATGTATTACCACATGGAGATTTTCAAGAAAGTGGATGTCATAGTAACTCCGACAACTGGCATGACAGCACCCGTAATACCTCCTAGTGCTCTTAAAAGTGGTGAAACAGATATGCAGACTACTGCCAACCTTATGCAGTTCGTTGTTCCAGCAAATCTTCTGGGACTCCCTGCCATTTCTGTCCCGGTTGGTTACGATAAAGAAGGACTTCCAATAGGTTTGCAAATAATGGGTCGACCATGGGCGGAAGCTACTATTCTGCGTGTAGCCTCTGCAGTGGAGAAACTCTGTGGTGAGTCAAAGAAAAAGCCTGCGTCATACTATGATGTTCTGAAGGCTAAATGA 1824 0.4298 MGKKRVMTPAKDVDLSTIKYEREVVQAPHLTGFVFRLFVRILEAPLIGSIIMNILKKENKIDELLRHTVIPEEPMFKPEYPPQEMEPGVVVLEEDGRPEDRVESALKCLPHYNVAELWENSSASFRYWKIRDYAHAYRSRKVTPSMVAERIISIIEENGRNKPPTPLLISFDAAEVRAQAAASTQRFEAGNPLSMLDGIFMAIKDDIDCYPHPSKGASTWMHEVRTVKKDAVCVSKLRSCGVIFIGKANMHELGMGTTGNNPNYGTTRNPHAPDRYTGGSSSGPAAIVASGLCSAALGTDGGGSIRIPSSLCGVVGLKTTYGRTSMEGSLCDSGTVEIIGPIASTVEDVMLVYAAMLGASPANRISLKPSPPCLPILSSNDDLNALGSLRIGKYTPWFNDVHSTEISDKCEDALDLLSKAHGCEMIEIVIPELLEMRTAHVVSIGSECLCSLNPDCEDGKGVKLTYDTRTSLALFRSFTAADYIAAQCIRRRNMYYHMEIFKKVDVIVTPTTGMTAPVIPPSALKSGETDMQTTANLMQFVVPANLLGLPAISVPVGYDKEGLPIGLQIMGRPWAEATILRVASAVEKLCGESKKKPASYYDVLKAK 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00995 607 ProSitePatterns Amidases signature. 278 309 IPR020556 -
Pumo2g00995 607 PANTHER TRANSAMIDASE 120 603 IPR000120 GO:0003824
Pumo2g00995 607 SUPERFAMILY Amidase signature (AS) enzymes 108 590 IPR036928 -
Pumo2g00995 607 Gene3D Amidase signature (AS) domain 130 590 IPR036928 -
Pumo2g00995 607 Pfam Amidase 169 580 IPR023631 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00995 Pumo-Chr2 15017867 15025111 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00995 1 605 Acyl Lipid Metabolism Gene Families AT5G64440 69.637 0.0 885
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00995 - - gmx:100778732 1153.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g00995 2 15017867 15025111 Pumo2g00995 2 15017867 15025111 ECH