Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00972 ATGGGGTTGCGCATTAAGGTTTCGTTTTGTGTATTGTGTGTGTTGGGATTGGTGATTGTGGGTGATCATGTTGTCTATGCTCAAGATTCACCAGAAGACTATGTGAATGCACACAACGCGGCACGATCAGAGGTGGCTGCTCAATCACCAAGAGCAACAGTGATTGTTCCAAATTTGGCTTGGGATGATACGGTTGCTGCTTATGCAGAGAGCTATGCTAATGAACGTAAAGGGGACTGCCAACTGATCCACTCTGGTGGTGAATACGGTGAGAATCTGGCAATGAGCACTGGTGACCTAAGTGGCACAGATGCAGTGAAAATGTGGGTTGATGAGAAAGCCAACTATGACTACAATTCCAACTCCTGTGTTGGTGGAGAGTGCCTGCACTACACTCAGGTCGTCTGGAGAGACTCTGTGCGTCTTGGATGTGCCAAAGTAACATGTGACAATGGAGGCACTTTCATCACTTGCAACTATGACCCCCCTGGCAACATTATTGGTGAAAGACCCTACATACTGTAG 525 0.4724 MGLRIKVSFCVLCVLGLVIVGDHVVYAQDSPEDYVNAHNAARSEVAAQSPRATVIVPNLAWDDTVAAYAESYANERKGDCQLIHSGGEYGENLAMSTGDLSGTDAVKMWVDEKANYDYNSNSCVGGECLHYTQVVWRDSVRLGCAKVTCDNGGTFITCNYDPPGNIIGERPYIL 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00972 174 Pfam Cysteine-rich secretory protein family 35 160 IPR014044 -
Pumo2g00972 174 ProSitePatterns CRISP family signature 2. 155 166 IPR018244 GO:0005576
Pumo2g00972 174 PANTHER CYSTEINE-RICH SECRETORY PROTEIN-RELATED 32 169 IPR001283 -
Pumo2g00972 174 SUPERFAMILY PR-1-like 7 172 IPR035940 -
Pumo2g00972 174 CDD CAP_PR-1 31 172 - -
Pumo2g00972 174 PRINTS Allergen V5/Tpx-1 family signature 105 118 IPR001283 -
Pumo2g00972 174 PRINTS Allergen V5/Tpx-1 family signature 59 77 IPR001283 -
Pumo2g00972 174 PRINTS Allergen V5/Tpx-1 family signature 128 144 IPR001283 -
Pumo2g00972 174 PRINTS Allergen V5/Tpx-1 family signature 155 168 IPR001283 -
Pumo2g00972 174 FunFam Putative pathogenesis-related protein 1 28 172 - -
Pumo2g00972 174 Gene3D CAP 29 172 IPR035940 -
Pumo2g00972 174 SMART SCP_3 29 168 IPR014044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00972 Pumo-Chr2 14555836 14556360 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00972 K13449 - gmx:100794832 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g00972 2 14555836 14556360 Pumo2g00972 2 14555836 14556360 ECH