Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo2g00931 ATGGCATCCAAGAGGAACACGGTTGTTTTTGAGGACTACTTCCCTGCAATGATGGAGAAGCTGGGGACTGAGGGGTTCATGAAGGAGCTGACAAACGGGTTTCAGTTGTTGATGGACAGAGAGAAGAAGGTGATAACGTTTGAGAGCTTGAAGAAGAACTCTGCATTGCTTGGGTTGGAAGGGATGAGCGATGATGAGATCAGGTGCATGCTAAGAGAAGGTGATCTTGATGGCGATGGGGCACTCGATGAGATGGAGTTCTGCACCCTCATGTTCAGGTTGAGCCCTGCTTTGATGAACAATTCCAAGGAGCTTTTGGAGGAAGCCATTTACCCTTATCATTAG 345 0.4783 MASKRNTVVFEDYFPAMMEKLGTEGFMKELTNGFQLLMDREKKVITFESLKKNSALLGLEGMSDDEIRCMLREGDLDGDGALDEMEFCTLMFRLSPALMNNSKELLEEAIYPYH 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo2g00931 114 SUPERFAMILY EF-hand 5 91 IPR011992 -
Pumo2g00931 114 ProSitePatterns EF-hand calcium-binding domain. 75 87 IPR018247 -
Pumo2g00931 114 Gene3D - 8 112 - -
Pumo2g00931 114 Pfam EF-hand domain pair 41 93 IPR002048 GO:0005509
Pumo2g00931 114 ProSiteProfiles EF-hand calcium-binding domain profile. 62 97 IPR002048 GO:0005509
Pumo2g00931 114 PANTHER CALCIUM-BINDING PROTEIN KIC 8 110 IPR044205 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo2g00931 Pumo-Chr2 13962850 13963669 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo2g00931 10 110 EF-hand Containing Proteins AT4G27280 59.804 2.15e-39 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo2g00931 K24345 - gmx:100306210 214.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo2g00931 2 13962850 13963669 Pumo2g00931 2 13962850 13963669 ECH